Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SERPINA13P-202ENST00000478994 924 ntBASIC14.72□□□□□ -0.05
CLDN6P56747 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.72□□□□□ -0.05
CLDN6P56747 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN6P56747 AP003171.2-201ENST00000528208 925 ntBASIC14.72□□□□□ -0.05
CLDN6P56747 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN6P56747 RN7SL48P-201ENST00000579283 293 ntBASIC14.72□□□□□ -0.05
CLDN6P56747 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CLDN6P56747 ENPP7P14-201ENST00000621765 1040 ntBASIC14.72□□□□□ -0.05
CLDN6P56747 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN6P56747 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN6P56747 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.72□□□□□ -0.05
CLDN6P56747 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN6P56747 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN6P56747 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN6P56747 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN6P56747 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN6P56747 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN6P56747 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.71□□□□□ -0.05
CLDN6P56747 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN6P56747 AC092978.1-202ENST00000637590 1327 ntBASIC14.71□□□□□ -0.05
CLDN6P56747 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CLDN6P56747 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
CLDN6P56747 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN6P56747 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN6P56747 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN6P56747 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CLDN6P56747 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.71□□□□□ -0.05
CLDN6P56747 AL133466.1-201ENST00000447582 150 ntBASIC14.71□□□□□ -0.05
CLDN6P56747 HIST2H2BB-201ENST00000449108 381 ntBASIC14.71□□□□□ -0.05
CLDN6P56747 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.71□□□□□ -0.05
CLDN6P56747 TMEM198B-204ENST00000484016 896 ntBASIC14.71□□□□□ -0.05
CLDN6P56747 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN6P56747 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN6P56747 RN7SL574P-201ENST00000581512 297 ntBASIC14.71□□□□□ -0.05
CLDN6P56747 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN6P56747 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CLDN6P56747 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN6P56747 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN6P56747 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.71□□□□□ -0.05
CLDN6P56747 AC073413.1-201ENST00000603927 732 ntBASIC14.71□□□□□ -0.05
CLDN6P56747 MIR7845-201ENST00000618396 99 ntBASIC14.71□□□□□ -0.05
CLDN6P56747 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CLDN6P56747 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN6P56747 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN6P56747 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.71□□□□□ -0.05
CLDN6P56747 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CLDN6P56747 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.71□□□□□ -0.05
CLDN6P56747 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLDN6P56747 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CLDN6P56747 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CLDN6P56747 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CLDN6P56747 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN6P56747 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN6P56747 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.7□□□□□ -0.06
CLDN6P56747 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN6P56747 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN6P56747 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN6P56747 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN6P56747 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.7□□□□□ -0.06
CLDN6P56747 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN6P56747 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CLDN6P56747 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN6P56747 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN6P56747 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN6P56747 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN6P56747 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CLDN6P56747 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN6P56747 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.7□□□□□ -0.06
CLDN6P56747 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN6P56747 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CLDN6P56747 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN6P56747 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN6P56747 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN6P56747 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN6P56747 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.7□□□□□ -0.06
CLDN6P56747 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CLDN6P56747 AC079178.1-201ENST00000420915 656 ntBASIC14.7□□□□□ -0.06
CLDN6P56747 AC114812.1-204ENST00000449669 728 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms