Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDE1AP54750 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE1AP54750 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE1AP54750 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.73■□□□□ 0.59
PDE1AP54750 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
PDE1AP54750 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDE1AP54750 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE1AP54750 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
PDE1AP54750 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
PDE1AP54750 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 AC099063.4-201ENST00000641099 1602 ntBASIC18.72■□□□□ 0.59
PDE1AP54750 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC18.72■□□□□ 0.59
PDE1AP54750 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 AL645937.2-201ENST00000396808 931 ntBASIC18.72■□□□□ 0.59
PDE1AP54750 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 MYCLP2-201ENST00000449268 967 ntBASIC18.72■□□□□ 0.59
PDE1AP54750 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.72■□□□□ 0.59
PDE1AP54750 ELK1P1-201ENST00000485699 580 ntBASIC18.72■□□□□ 0.59
PDE1AP54750 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.72■□□□□ 0.59
PDE1AP54750 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE1AP54750 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PDE1AP54750 SPDYE22P-201ENST00000582158 798 ntBASIC18.72■□□□□ 0.59
PDE1AP54750 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE1AP54750 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
PDE1AP54750 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE1AP54750 AC007431.3-201ENST00000623221 587 ntBASIC18.72■□□□□ 0.59
PDE1AP54750 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.72■□□□□ 0.59
PDE1AP54750 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE1AP54750 AL390755.1-201ENST00000623716 2027 ntBASIC18.72■□□□□ 0.59
PDE1AP54750 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.72■□□□□ 0.59
PDE1AP54750 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE1AP54750 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE1AP54750 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE1AP54750 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE1AP54750 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.72■□□□□ 0.59
PDE1AP54750 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE1AP54750 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE1AP54750 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE1AP54750 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.71■□□□□ 0.59
PDE1AP54750 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PDE1AP54750 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.71■□□□□ 0.59
PDE1AP54750 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.71■□□□□ 0.59
PDE1AP54750 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.71■□□□□ 0.59
PDE1AP54750 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PDE1AP54750 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.71■□□□□ 0.59
PDE1AP54750 C1QBPP1-201ENST00000400117 770 ntBASIC18.71■□□□□ 0.59
PDE1AP54750 AC087499.6-201ENST00000411576 835 ntBASIC18.71■□□□□ 0.59
PDE1AP54750 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.71■□□□□ 0.59
PDE1AP54750 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.71■□□□□ 0.59
PDE1AP54750 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.71■□□□□ 0.59
PDE1AP54750 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.71■□□□□ 0.59
PDE1AP54750 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.71■□□□□ 0.59
PDE1AP54750 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 CTBP2P3-201ENST00000585629 1255 ntBASIC18.71■□□□□ 0.59
PDE1AP54750 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.71■□□□□ 0.59
PDE1AP54750 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.71■□□□□ 0.59
PDE1AP54750 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PDE1AP54750 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.71■□□□□ 0.59
PDE1AP54750 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.71■□□□□ 0.59
PDE1AP54750 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE1AP54750 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE1AP54750 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms