Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.92■□□□□ 0.3
PMS1P54277 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.92■□□□□ 0.3
PMS1P54277 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.92■□□□□ 0.3
PMS1P54277 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PMS1P54277 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.92■□□□□ 0.3
PMS1P54277 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
PMS1P54277 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PMS1P54277 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.91■□□□□ 0.3
PMS1P54277 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PMS1P54277 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PMS1P54277 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.91■□□□□ 0.3
PMS1P54277 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PMS1P54277 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PMS1P54277 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PMS1P54277 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.91■□□□□ 0.3
PMS1P54277 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
PMS1P54277 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.91■□□□□ 0.3
PMS1P54277 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.91■□□□□ 0.3
PMS1P54277 AC097359.2-201ENST00000604992 2389 ntBASIC16.91■□□□□ 0.3
PMS1P54277 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PMS1P54277 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PMS1P54277 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PMS1P54277 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.91■□□□□ 0.3
PMS1P54277 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PMS1P54277 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PMS1P54277 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.91■□□□□ 0.3
PMS1P54277 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PMS1P54277 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PMS1P54277 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.91■□□□□ 0.3
PMS1P54277 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PMS1P54277 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.91■□□□□ 0.3
PMS1P54277 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.91■□□□□ 0.3
PMS1P54277 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.91■□□□□ 0.3
PMS1P54277 AC005498.2-205ENST00000593218 784 ntBASIC16.91■□□□□ 0.3
PMS1P54277 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.91■□□□□ 0.3
PMS1P54277 AC006538.3-201ENST00000612495 578 ntBASIC16.91■□□□□ 0.3
PMS1P54277 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
PMS1P54277 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PMS1P54277 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.91■□□□□ 0.3
PMS1P54277 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.91■□□□□ 0.3
PMS1P54277 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PMS1P54277 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PMS1P54277 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PMS1P54277 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PMS1P54277 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PMS1P54277 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PMS1P54277 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.91■□□□□ 0.3
PMS1P54277 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PMS1P54277 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PMS1P54277 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
PMS1P54277 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PMS1P54277 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PMS1P54277 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PMS1P54277 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
PMS1P54277 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PMS1P54277 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.9■□□□□ 0.3
PMS1P54277 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.9■□□□□ 0.3
PMS1P54277 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PMS1P54277 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PMS1P54277 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.9■□□□□ 0.3
PMS1P54277 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PMS1P54277 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
PMS1P54277 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PMS1P54277 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PMS1P54277 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
PMS1P54277 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.9■□□□□ 0.3
PMS1P54277 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.9■□□□□ 0.3
PMS1P54277 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.9■□□□□ 0.3
PMS1P54277 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.9■□□□□ 0.3
PMS1P54277 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.9■□□□□ 0.3
PMS1P54277 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.9■□□□□ 0.3
PMS1P54277 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PMS1P54277 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PMS1P54277 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PMS1P54277 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PMS1P54277 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
PMS1P54277 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PMS1P54277 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PMS1P54277 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.9■□□□□ 0.3
PMS1P54277 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.9■□□□□ 0.3
PMS1P54277 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.9■□□□□ 0.3
PMS1P54277 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PMS1P54277 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PMS1P54277 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PMS1P54277 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.89■□□□□ 0.3
PMS1P54277 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
PMS1P54277 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PMS1P54277 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PMS1P54277 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PMS1P54277 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PMS1P54277 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.89■□□□□ 0.29
PMS1P54277 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
PMS1P54277 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PMS1P54277 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PMS1P54277 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PMS1P54277 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms