Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SLED1-202ENST00000512051 380 ntBASIC15.9■□□□□ 0.14
NEK3P51956 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.9■□□□□ 0.14
NEK3P51956 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.9■□□□□ 0.14
NEK3P51956 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.9■□□□□ 0.14
NEK3P51956 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.9■□□□□ 0.14
NEK3P51956 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.9■□□□□ 0.14
NEK3P51956 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.9■□□□□ 0.14
NEK3P51956 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.9■□□□□ 0.14
NEK3P51956 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NEK3P51956 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.9■□□□□ 0.14
NEK3P51956 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NEK3P51956 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NEK3P51956 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
NEK3P51956 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NEK3P51956 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NEK3P51956 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
NEK3P51956 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NEK3P51956 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.9■□□□□ 0.14
NEK3P51956 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NEK3P51956 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NEK3P51956 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NEK3P51956 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NEK3P51956 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NEK3P51956 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.9■□□□□ 0.14
NEK3P51956 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NEK3P51956 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NEK3P51956 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.9■□□□□ 0.14
NEK3P51956 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.9■□□□□ 0.14
NEK3P51956 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NEK3P51956 AC005089.1-201ENST00000619486 2241 ntBASIC15.9■□□□□ 0.14
NEK3P51956 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NEK3P51956 AC007191.1-201ENST00000623179 2995 ntBASIC15.9■□□□□ 0.14
NEK3P51956 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NEK3P51956 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NEK3P51956 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NEK3P51956 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NEK3P51956 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.89■□□□□ 0.13
NEK3P51956 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NEK3P51956 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.89■□□□□ 0.13
NEK3P51956 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.89■□□□□ 0.13
NEK3P51956 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
NEK3P51956 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.89■□□□□ 0.13
NEK3P51956 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NEK3P51956 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NEK3P51956 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
NEK3P51956 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.89■□□□□ 0.13
NEK3P51956 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.89■□□□□ 0.13
NEK3P51956 AC104596.2-201ENST00000512793 793 ntBASIC15.89■□□□□ 0.13
NEK3P51956 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.89■□□□□ 0.13
NEK3P51956 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.89■□□□□ 0.13
NEK3P51956 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.89■□□□□ 0.13
NEK3P51956 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.89■□□□□ 0.13
NEK3P51956 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 AL158212.4-201ENST00000624062 1286 ntBASIC15.89■□□□□ 0.13
NEK3P51956 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.89■□□□□ 0.13
NEK3P51956 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
NEK3P51956 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 LINC00552-201ENST00000625151 2579 ntBASIC15.89■□□□□ 0.13
NEK3P51956 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
NEK3P51956 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.89■□□□□ 0.13
NEK3P51956 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NEK3P51956 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.89■□□□□ 0.13
NEK3P51956 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NEK3P51956 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NEK3P51956 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NEK3P51956 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEK3P51956 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.88■□□□□ 0.13
NEK3P51956 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEK3P51956 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NEK3P51956 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.88■□□□□ 0.13
NEK3P51956 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEK3P51956 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.88■□□□□ 0.13
NEK3P51956 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.88■□□□□ 0.13
NEK3P51956 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEK3P51956 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEK3P51956 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEK3P51956 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.88■□□□□ 0.13
NEK3P51956 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms