Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC023024.2-201ENST00000623561 1993 ntBASIC16.47■□□□□ 0.23
SSR1P43307 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SSR1P43307 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SSR1P43307 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR1P43307 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SSR1P43307 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SSR1P43307 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.47■□□□□ 0.23
SSR1P43307 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SSR1P43307 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR1P43307 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.46■□□□□ 0.23
SSR1P43307 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.46■□□□□ 0.23
SSR1P43307 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
SSR1P43307 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.46■□□□□ 0.23
SSR1P43307 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.46■□□□□ 0.23
SSR1P43307 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.46■□□□□ 0.23
SSR1P43307 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 MIR1233-2-201ENST00000408138 82 ntBASIC16.46■□□□□ 0.23
SSR1P43307 MIR1233-1-201ENST00000408722 82 ntBASIC16.46■□□□□ 0.23
SSR1P43307 TARDBPP1-201ENST00000442013 1203 ntBASIC16.46■□□□□ 0.23
SSR1P43307 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.46■□□□□ 0.23
SSR1P43307 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.46■□□□□ 0.23
SSR1P43307 AP006288.1-201ENST00000446065 395 ntBASIC16.46■□□□□ 0.23
SSR1P43307 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 DNAJB3-202ENST00000449667 1266 ntBASIC16.46■□□□□ 0.23
SSR1P43307 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.46■□□□□ 0.23
SSR1P43307 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.46■□□□□ 0.23
SSR1P43307 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.46■□□□□ 0.23
SSR1P43307 AC004449.1-201ENST00000564240 433 ntBASIC16.46■□□□□ 0.23
SSR1P43307 MIR6069-201ENST00000620069 79 ntBASIC16.46■□□□□ 0.23
SSR1P43307 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
SSR1P43307 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.46■□□□□ 0.23
SSR1P43307 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.46■□□□□ 0.23
SSR1P43307 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSR1P43307 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SSR1P43307 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
SSR1P43307 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SSR1P43307 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SSR1P43307 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SSR1P43307 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SSR1P43307 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.45■□□□□ 0.22
SSR1P43307 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSR1P43307 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.45■□□□□ 0.22
SSR1P43307 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC16.45■□□□□ 0.22
SSR1P43307 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSR1P43307 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSR1P43307 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSR1P43307 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SSR1P43307 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSR1P43307 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SSR1P43307 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSR1P43307 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSR1P43307 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSR1P43307 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSR1P43307 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.45■□□□□ 0.22
SSR1P43307 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.45■□□□□ 0.22
SSR1P43307 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.45■□□□□ 0.22
SSR1P43307 AC109322.1-201ENST00000524499 1264 ntBASIC16.45■□□□□ 0.22
SSR1P43307 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.45■□□□□ 0.22
SSR1P43307 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.45■□□□□ 0.22
SSR1P43307 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.45■□□□□ 0.22
SSR1P43307 AL691403.2-201ENST00000618460 490 ntBASIC16.45■□□□□ 0.22
SSR1P43307 KRT8P44-201ENST00000441609 1350 ntBASIC16.45■□□□□ 0.22
SSR1P43307 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSR1P43307 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.45■□□□□ 0.22
SSR1P43307 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSR1P43307 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSR1P43307 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
SSR1P43307 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SSR1P43307 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSR1P43307 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SSR1P43307 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.45■□□□□ 0.22
SSR1P43307 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.45■□□□□ 0.22
SSR1P43307 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.45■□□□□ 0.22
SSR1P43307 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.45■□□□□ 0.22
SSR1P43307 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SSR1P43307 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSR1P43307 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSR1P43307 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSR1P43307 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC16.44■□□□□ 0.22
SSR1P43307 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSR1P43307 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SSR1P43307 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSR1P43307 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.44■□□□□ 0.22
SSR1P43307 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms