Protein–RNA interactions for Protein: P28070

PSMB4, Proteasome subunit beta type-4, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4P28070 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSMB4P28070 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.67■□□□□ 0.1
PSMB4P28070 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.67■□□□□ 0.1
PSMB4P28070 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
PSMB4P28070 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.67■□□□□ 0.1
PSMB4P28070 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
PSMB4P28070 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.67■□□□□ 0.1
PSMB4P28070 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.67■□□□□ 0.1
PSMB4P28070 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PSMB4P28070 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.67■□□□□ 0.1
PSMB4P28070 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.67■□□□□ 0.1
PSMB4P28070 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSMB4P28070 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSMB4P28070 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSMB4P28070 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.67■□□□□ 0.1
PSMB4P28070 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSMB4P28070 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSMB4P28070 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PSMB4P28070 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PSMB4P28070 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.67■□□□□ 0.1
PSMB4P28070 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSMB4P28070 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PSMB4P28070 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PSMB4P28070 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSMB4P28070 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.67■□□□□ 0.1
PSMB4P28070 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSMB4P28070 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PSMB4P28070 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PSMB4P28070 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PSMB4P28070 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PSMB4P28070 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.67■□□□□ 0.1
PSMB4P28070 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PSMB4P28070 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.66■□□□□ 0.1
PSMB4P28070 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.66■□□□□ 0.1
PSMB4P28070 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.66■□□□□ 0.1
PSMB4P28070 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.66■□□□□ 0.1
PSMB4P28070 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.66■□□□□ 0.1
PSMB4P28070 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.66■□□□□ 0.1
PSMB4P28070 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.66■□□□□ 0.1
PSMB4P28070 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
PSMB4P28070 AC023310.3-201ENST00000557027 670 ntBASIC15.66■□□□□ 0.1
PSMB4P28070 AC100756.1-201ENST00000562736 682 ntBASIC15.66■□□□□ 0.1
PSMB4P28070 AC138749.3-201ENST00000567691 622 ntBASIC15.66■□□□□ 0.1
PSMB4P28070 SAMD11P1-201ENST00000571429 661 ntBASIC15.66■□□□□ 0.1
PSMB4P28070 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PSMB4P28070 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.66■□□□□ 0.1
PSMB4P28070 AC116165.1-201ENST00000611806 668 ntBASIC15.66■□□□□ 0.1
PSMB4P28070 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PSMB4P28070 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PSMB4P28070 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.66■□□□□ 0.1
PSMB4P28070 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PSMB4P28070 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.66■□□□□ 0.1
PSMB4P28070 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PSMB4P28070 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PSMB4P28070 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PSMB4P28070 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PSMB4P28070 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PSMB4P28070 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PSMB4P28070 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.65■□□□□ 0.1
PSMB4P28070 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PSMB4P28070 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PSMB4P28070 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PSMB4P28070 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PSMB4P28070 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.65■□□□□ 0.1
PSMB4P28070 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.65■□□□□ 0.1
PSMB4P28070 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PSMB4P28070 CYMP-203ENST00000474680 1263 ntBASIC15.65■□□□□ 0.1
PSMB4P28070 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.65■□□□□ 0.1
PSMB4P28070 DOC2GP-202ENST00000514950 1163 ntBASIC15.65■□□□□ 0.1
PSMB4P28070 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.65■□□□□ 0.1
PSMB4P28070 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.65■□□□□ 0.1
PSMB4P28070 TPRX2P-201ENST00000535362 881 ntBASIC15.65■□□□□ 0.1
PSMB4P28070 AC036164.1-201ENST00000570544 333 ntBASIC15.65■□□□□ 0.1
PSMB4P28070 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.65■□□□□ 0.1
PSMB4P28070 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms