Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.2■□□□□ 0.34
GGPS1O95749 MIR4741-201ENST00000579822 90 ntBASIC17.2■□□□□ 0.34
GGPS1O95749 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
GGPS1O95749 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.2■□□□□ 0.34
GGPS1O95749 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GGPS1O95749 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GGPS1O95749 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
GGPS1O95749 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GGPS1O95749 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GGPS1O95749 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.2■□□□□ 0.34
GGPS1O95749 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 AC105250.1-201ENST00000509378 2057 ntBASIC17.19■□□□□ 0.34
GGPS1O95749 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 KRT8P44-201ENST00000441609 1350 ntBASIC17.19■□□□□ 0.34
GGPS1O95749 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
GGPS1O95749 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GGPS1O95749 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.19■□□□□ 0.34
GGPS1O95749 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.19■□□□□ 0.34
GGPS1O95749 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.19■□□□□ 0.34
GGPS1O95749 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.19■□□□□ 0.34
GGPS1O95749 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.19■□□□□ 0.34
GGPS1O95749 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
GGPS1O95749 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.19■□□□□ 0.34
GGPS1O95749 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.19■□□□□ 0.34
GGPS1O95749 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.19■□□□□ 0.34
GGPS1O95749 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
GGPS1O95749 MIR6787-201ENST00000616675 61 ntBASIC17.19■□□□□ 0.34
GGPS1O95749 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
GGPS1O95749 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 ENPP7P14-201ENST00000621765 1040 ntBASIC17.19■□□□□ 0.34
GGPS1O95749 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.19■□□□□ 0.34
GGPS1O95749 AL354989.2-201ENST00000435838 1540 ntBASIC17.19■□□□□ 0.34
GGPS1O95749 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.19■□□□□ 0.34
GGPS1O95749 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
GGPS1O95749 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.19■□□□□ 0.34
GGPS1O95749 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
GGPS1O95749 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GGPS1O95749 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GGPS1O95749 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GGPS1O95749 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.18■□□□□ 0.34
GGPS1O95749 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GGPS1O95749 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.18■□□□□ 0.34
GGPS1O95749 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GGPS1O95749 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
GGPS1O95749 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.18■□□□□ 0.34
GGPS1O95749 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.18■□□□□ 0.34
GGPS1O95749 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GGPS1O95749 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GGPS1O95749 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GGPS1O95749 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GGPS1O95749 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
GGPS1O95749 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GGPS1O95749 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GGPS1O95749 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
GGPS1O95749 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GGPS1O95749 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.18■□□□□ 0.34
GGPS1O95749 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.18■□□□□ 0.34
GGPS1O95749 EIF3FP3-201ENST00000434851 1086 ntBASIC17.18■□□□□ 0.34
GGPS1O95749 GOLGA2P4-201ENST00000441462 777 ntBASIC17.18■□□□□ 0.34
GGPS1O95749 Z93015.1-201ENST00000451718 390 ntBASIC17.18■□□□□ 0.34
GGPS1O95749 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.18■□□□□ 0.34
GGPS1O95749 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.18■□□□□ 0.34
GGPS1O95749 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GGPS1O95749 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.18■□□□□ 0.34
GGPS1O95749 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GGPS1O95749 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.18■□□□□ 0.34
GGPS1O95749 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GGPS1O95749 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GGPS1O95749 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
GGPS1O95749 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GGPS1O95749 AC092850.2-201ENST00000623821 2697 ntBASIC17.18■□□□□ 0.34
GGPS1O95749 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
GGPS1O95749 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GGPS1O95749 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.18■□□□□ 0.34
GGPS1O95749 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
GGPS1O95749 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.17■□□□□ 0.34
GGPS1O95749 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.17■□□□□ 0.34
GGPS1O95749 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 AC020907.1-201ENST00000616460 1350 ntBASIC17.17■□□□□ 0.34
GGPS1O95749 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.17■□□□□ 0.34
GGPS1O95749 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.17■□□□□ 0.34
GGPS1O95749 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
GGPS1O95749 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms