Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
CCNKO75909 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.39□□□□□ -0.27
CCNKO75909 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
CCNKO75909 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CCNKO75909 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.39□□□□□ -0.27
CCNKO75909 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.39□□□□□ -0.27
CCNKO75909 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCNKO75909 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.39□□□□□ -0.27
CCNKO75909 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CCNKO75909 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CCNKO75909 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CCNKO75909 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CCNKO75909 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CCNKO75909 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CCNKO75909 BNIP3P1-202ENST00000550043 1585 ntBASIC13.38□□□□□ -0.27
CCNKO75909 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.38□□□□□ -0.27
CCNKO75909 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 RNF152P1-201ENST00000397754 604 ntBASIC13.38□□□□□ -0.27
CCNKO75909 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CCNKO75909 AC113347.1-201ENST00000413321 391 ntBASIC13.38□□□□□ -0.27
CCNKO75909 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.38□□□□□ -0.27
CCNKO75909 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CCNKO75909 AL645929.1-201ENST00000420084 975 ntBASIC13.38□□□□□ -0.27
CCNKO75909 AL137013.1-201ENST00000432946 1228 ntBASIC13.38□□□□□ -0.27
CCNKO75909 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.38□□□□□ -0.27
CCNKO75909 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.38□□□□□ -0.27
CCNKO75909 TMEM198B-204ENST00000484016 896 ntBASIC13.38□□□□□ -0.27
CCNKO75909 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.38□□□□□ -0.27
CCNKO75909 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.38□□□□□ -0.27
CCNKO75909 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.38□□□□□ -0.27
CCNKO75909 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.38□□□□□ -0.27
CCNKO75909 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.38□□□□□ -0.27
CCNKO75909 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.38□□□□□ -0.27
CCNKO75909 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.38□□□□□ -0.27
CCNKO75909 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CCNKO75909 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.38□□□□□ -0.27
CCNKO75909 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.38□□□□□ -0.27
CCNKO75909 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
CCNKO75909 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.38□□□□□ -0.27
CCNKO75909 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.38□□□□□ -0.27
CCNKO75909 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CCNKO75909 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
CCNKO75909 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CCNKO75909 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
CCNKO75909 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.37□□□□□ -0.27
CCNKO75909 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CCNKO75909 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.37□□□□□ -0.27
CCNKO75909 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
CCNKO75909 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.37□□□□□ -0.27
CCNKO75909 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
CCNKO75909 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.37□□□□□ -0.27
CCNKO75909 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CCNKO75909 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms