Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.41□□□□□ -0.26
UPK1BO75841 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
UPK1BO75841 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.41□□□□□ -0.26
UPK1BO75841 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
UPK1BO75841 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.41□□□□□ -0.26
UPK1BO75841 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
UPK1BO75841 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
UPK1BO75841 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.41□□□□□ -0.26
UPK1BO75841 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.41□□□□□ -0.26
UPK1BO75841 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.41□□□□□ -0.26
UPK1BO75841 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 AC112907.2-201ENST00000448639 330 ntBASIC13.41□□□□□ -0.26
UPK1BO75841 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.41□□□□□ -0.26
UPK1BO75841 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
UPK1BO75841 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
UPK1BO75841 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
UPK1BO75841 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.41□□□□□ -0.26
UPK1BO75841 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.41□□□□□ -0.26
UPK1BO75841 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
UPK1BO75841 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.41□□□□□ -0.26
UPK1BO75841 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.41□□□□□ -0.26
UPK1BO75841 AP002761.4-201ENST00000565433 3361 ntBASIC13.41□□□□□ -0.26
UPK1BO75841 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.41□□□□□ -0.26
UPK1BO75841 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.41□□□□□ -0.26
UPK1BO75841 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.41□□□□□ -0.26
UPK1BO75841 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UPK1BO75841 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
UPK1BO75841 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.4□□□□□ -0.26
UPK1BO75841 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.4□□□□□ -0.26
UPK1BO75841 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.4□□□□□ -0.26
UPK1BO75841 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
UPK1BO75841 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.4□□□□□ -0.26
UPK1BO75841 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.4□□□□□ -0.26
UPK1BO75841 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.4□□□□□ -0.26
UPK1BO75841 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.4□□□□□ -0.26
UPK1BO75841 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
UPK1BO75841 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.4□□□□□ -0.26
UPK1BO75841 SPDYE13P-201ENST00000445314 798 ntBASIC13.4□□□□□ -0.26
UPK1BO75841 KRT18P38-201ENST00000449496 1282 ntBASIC13.4□□□□□ -0.26
UPK1BO75841 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 BX005266.1-201ENST00000473402 457 ntBASIC13.4□□□□□ -0.26
UPK1BO75841 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.4□□□□□ -0.26
UPK1BO75841 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.4□□□□□ -0.26
UPK1BO75841 MIR3909-201ENST00000579518 119 ntBASIC13.4□□□□□ -0.26
UPK1BO75841 AL450472.2-201ENST00000603663 1156 ntBASIC13.4□□□□□ -0.26
UPK1BO75841 SPTSSB-204ENST00000617024 1292 ntBASIC13.4□□□□□ -0.26
UPK1BO75841 GGTLC5P-201ENST00000617623 998 ntBASIC13.4□□□□□ -0.26
UPK1BO75841 AL589182.2-201ENST00000619332 1049 ntBASIC13.4□□□□□ -0.26
UPK1BO75841 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
UPK1BO75841 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
UPK1BO75841 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.4□□□□□ -0.26
UPK1BO75841 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.4□□□□□ -0.26
UPK1BO75841 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.4□□□□□ -0.26
UPK1BO75841 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.4□□□□□ -0.26
UPK1BO75841 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
UPK1BO75841 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK1BO75841 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.27
UPK1BO75841 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
UPK1BO75841 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.4□□□□□ -0.27
UPK1BO75841 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
UPK1BO75841 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.39□□□□□ -0.27
UPK1BO75841 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms