Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 MIR4313-201ENST00000580760 101 ntBASIC12.08□□□□□ -0.48
ZNF253O75346 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.08□□□□□ -0.48
ZNF253O75346 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF253O75346 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF253O75346 AL450472.2-201ENST00000603663 1156 ntBASIC12.08□□□□□ -0.48
ZNF253O75346 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.08□□□□□ -0.48
ZNF253O75346 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.08□□□□□ -0.48
ZNF253O75346 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF253O75346 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ZNF253O75346 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.08□□□□□ -0.48
ZNF253O75346 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF253O75346 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.08□□□□□ -0.48
ZNF253O75346 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZNF253O75346 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
ZNF253O75346 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
ZNF253O75346 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF253O75346 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF253O75346 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
ZNF253O75346 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 AC127383.1-201ENST00000444697 1800 ntBASIC12.07□□□□□ -0.48
ZNF253O75346 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
ZNF253O75346 FAM220BP-201ENST00000377689 816 ntBASIC12.07□□□□□ -0.48
ZNF253O75346 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF253O75346 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF253O75346 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF253O75346 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF253O75346 AC026979.3-201ENST00000607315 403 ntBASIC12.07□□□□□ -0.48
ZNF253O75346 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ZNF253O75346 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.07□□□□□ -0.48
ZNF253O75346 AJ011931.1-201ENST00000618749 2492 ntBASIC12.07□□□□□ -0.48
ZNF253O75346 AC008267.7-201ENST00000624570 1194 ntBASIC12.07□□□□□ -0.48
ZNF253O75346 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.07□□□□□ -0.48
ZNF253O75346 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF253O75346 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 AC148477.4-201ENST00000613430 1793 ntBASIC12.07□□□□□ -0.48
ZNF253O75346 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ZNF253O75346 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.07□□□□□ -0.48
ZNF253O75346 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 CR383656.2-201ENST00000548656 2254 ntBASIC12.07□□□□□ -0.48
ZNF253O75346 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
ZNF253O75346 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF253O75346 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF253O75346 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF253O75346 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
ZNF253O75346 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF253O75346 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms