Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 AC012508.2-201ENST00000567613 1472 ntBASIC13.72□□□□□ -0.21
TRAF3IP2O43734 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAF3IP2O43734 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 RPL13AP25-201ENST00000484130 612 ntBASIC13.71□□□□□ -0.21
TRAF3IP2O43734 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 MIR4745-201ENST00000577608 62 ntBASIC13.71□□□□□ -0.21
TRAF3IP2O43734 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.71□□□□□ -0.21
TRAF3IP2O43734 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 AC007541.1-201ENST00000570282 1469 ntBASIC13.71□□□□□ -0.21
TRAF3IP2O43734 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRAF3IP2O43734 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAF3IP2O43734 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAF3IP2O43734 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
TRAF3IP2O43734 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAF3IP2O43734 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.71□□□□□ -0.22
TRAF3IP2O43734 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.71□□□□□ -0.22
TRAF3IP2O43734 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAF3IP2O43734 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAF3IP2O43734 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAF3IP2O43734 LINC00528-201ENST00000600723 2160 ntBASIC13.71□□□□□ -0.22
TRAF3IP2O43734 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.71□□□□□ -0.22
TRAF3IP2O43734 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAF3IP2O43734 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.7□□□□□ -0.22
TRAF3IP2O43734 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 INTS4P2-202ENST00000614726 2019 ntBASIC13.7□□□□□ -0.22
TRAF3IP2O43734 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 AC098850.1-201ENST00000419919 790 ntBASIC13.7□□□□□ -0.22
TRAF3IP2O43734 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAF3IP2O43734 AC004066.1-201ENST00000502488 802 ntBASIC13.7□□□□□ -0.22
TRAF3IP2O43734 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms