Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMX3A6NHT5 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HMX3A6NHT5 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HMX3A6NHT5 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMX3A6NHT5 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMX3A6NHT5 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 PI4KAP1-204ENST00000612579 1703 ntBASIC13.42□□□□□ -0.26
HMX3A6NHT5 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 AC006504.4-201ENST00000592118 1568 ntBASIC13.42□□□□□ -0.26
HMX3A6NHT5 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 ELK2BP-201ENST00000415014 1224 ntBASIC13.42□□□□□ -0.26
HMX3A6NHT5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 AC091167.2-201ENST00000579581 588 ntBASIC13.42□□□□□ -0.26
HMX3A6NHT5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMX3A6NHT5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
HMX3A6NHT5 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 BEND3P3-201ENST00000611030 2440 ntBASIC13.41□□□□□ -0.26
HMX3A6NHT5 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 RPS2P1-201ENST00000434010 821 ntBASIC13.41□□□□□ -0.26
HMX3A6NHT5 TMEM198B-204ENST00000484016 896 ntBASIC13.41□□□□□ -0.26
HMX3A6NHT5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms