Protein–RNA interactions for Protein: Q9UJ99

CDH22, Cadherin-22, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH22Q9UJ99 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 ECM1P1-201ENST00000604092 1279 ntBASIC16.31■□□□□ 0.2
CDH22Q9UJ99 AC244452.3-201ENST00000636814 210 ntBASIC16.31■□□□□ 0.2
CDH22Q9UJ99 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 AL596087.1-201ENST00000400979 1969 ntBASIC16.31■□□□□ 0.2
CDH22Q9UJ99 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH22Q9UJ99 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 AP001282.1-201ENST00000531301 1499 ntBASIC16.3■□□□□ 0.2
CDH22Q9UJ99 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.3■□□□□ 0.2
CDH22Q9UJ99 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 AC093813.1-201ENST00000605066 256 ntBASIC16.3■□□□□ 0.2
CDH22Q9UJ99 AL451050.2-201ENST00000606967 682 ntBASIC16.3■□□□□ 0.2
CDH22Q9UJ99 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH22Q9UJ99 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.29■□□□□ 0.2
CDH22Q9UJ99 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 CHMP4BP1-201ENST00000556017 588 ntBASIC16.29■□□□□ 0.2
CDH22Q9UJ99 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 AC010491.1-201ENST00000563101 2797 ntBASIC16.29■□□□□ 0.2
CDH22Q9UJ99 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH22Q9UJ99 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH22Q9UJ99 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH22Q9UJ99 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CDH22Q9UJ99 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms