Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 PMS2P2-201ENST00000425039 1128 ntBASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 AC023908.3-201ENST00000564211 3047 ntBASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 AC007686.3-201ENST00000619017 3487 ntBASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 TUBB3P1-201ENST00000405796 1332 ntBASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 AC026748.1-201ENST00000624349 3251 ntBASIC12.86□□□□□ -0.35
LIN7CQ9NUP9 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
LIN7CQ9NUP9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms