Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.57□□□□□ -0.08
NR1H4Q96RI1 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 AC104819.1-201ENST00000504587 486 ntBASIC14.56□□□□□ -0.08
NR1H4Q96RI1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 AC019294.4-201ENST00000561777 2905 ntBASIC14.56□□□□□ -0.08
NR1H4Q96RI1 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 INTS4P1-201ENST00000438455 1935 ntBASIC14.56□□□□□ -0.08
NR1H4Q96RI1 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
NR1H4Q96RI1 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.55□□□□□ -0.08
NR1H4Q96RI1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms