Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 AC107918.4-201ENST00000641966 3141 ntBASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.87■□□□□ 0.45
CHAMP1Q96JM3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 AC136759.1-202ENST00000530858 2194 ntBASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 KRT18P32-201ENST00000424695 1287 ntBASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 CEND1P1-201ENST00000451006 455 ntBASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 AC040169.1-201ENST00000565382 521 ntBASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 MIR4453-201ENST00000584019 89 ntBASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 LINC01115-203ENST00000606068 577 ntBASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 ELL2P1-201ENST00000413990 1906 ntBASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHAMP1Q96JM3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.85■□□□□ 0.45
CHAMP1Q96JM3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHAMP1Q96JM3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
CHAMP1Q96JM3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CHAMP1Q96JM3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHAMP1Q96JM3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms