Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CCDC33Q8N5R6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC33Q8N5R6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CCDC33Q8N5R6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC33Q8N5R6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC33Q8N5R6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.21■□□□□ 0.18
CCDC33Q8N5R6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC33Q8N5R6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC33Q8N5R6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 AC022494.1-201ENST00000466044 728 ntBASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 RN7SL399P-201ENST00000471648 279 ntBASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 SNX29P1-201ENST00000548357 1007 ntBASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 AC010319.3-201ENST00000597028 470 ntBASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 MIR6775-201ENST00000617557 69 ntBASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC33Q8N5R6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 TMBIM7P-203ENST00000641617 1718 ntBASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 Z97205.2-201ENST00000564697 1639 ntBASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC33Q8N5R6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 AL109954.1-202ENST00000564051 2148 ntBASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC33Q8N5R6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms