Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.21■□□□□ 0.19
ALYREFQ86V81 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.21■□□□□ 0.19
ALYREFQ86V81 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.21■□□□□ 0.19
ALYREFQ86V81 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.21■□□□□ 0.19
ALYREFQ86V81 MIR3909-201ENST00000579518 119 ntBASIC16.21■□□□□ 0.19
ALYREFQ86V81 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.21■□□□□ 0.19
ALYREFQ86V81 EEF1DP1-201ENST00000585891 896 ntBASIC16.21■□□□□ 0.19
ALYREFQ86V81 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.21■□□□□ 0.19
ALYREFQ86V81 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ALYREFQ86V81 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.21■□□□□ 0.19
ALYREFQ86V81 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALYREFQ86V81 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ALYREFQ86V81 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.21■□□□□ 0.19
ALYREFQ86V81 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALYREFQ86V81 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ALYREFQ86V81 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALYREFQ86V81 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALYREFQ86V81 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.21■□□□□ 0.18
ALYREFQ86V81 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
ALYREFQ86V81 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.21■□□□□ 0.18
ALYREFQ86V81 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.21■□□□□ 0.18
ALYREFQ86V81 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.21■□□□□ 0.18
ALYREFQ86V81 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ALYREFQ86V81 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ALYREFQ86V81 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 AC023157.3-201ENST00000619086 2088 ntBASIC16.2■□□□□ 0.18
ALYREFQ86V81 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 FAM220BP-201ENST00000377689 816 ntBASIC16.2■□□□□ 0.18
ALYREFQ86V81 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 AL133466.1-201ENST00000447582 150 ntBASIC16.2■□□□□ 0.18
ALYREFQ86V81 AC004898.1-201ENST00000451057 766 ntBASIC16.2■□□□□ 0.18
ALYREFQ86V81 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 FTH1P14-201ENST00000482930 551 ntBASIC16.2■□□□□ 0.18
ALYREFQ86V81 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 AL033527.5-202ENST00000641632 1098 ntBASIC16.2■□□□□ 0.18
ALYREFQ86V81 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 AL353732.1-201ENST00000569618 1459 ntBASIC16.2■□□□□ 0.18
ALYREFQ86V81 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ALYREFQ86V81 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
ALYREFQ86V81 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALYREFQ86V81 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.19■□□□□ 0.18
ALYREFQ86V81 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALYREFQ86V81 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.19■□□□□ 0.18
ALYREFQ86V81 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.19■□□□□ 0.18
ALYREFQ86V81 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALYREFQ86V81 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ALYREFQ86V81 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALYREFQ86V81 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
ALYREFQ86V81 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALYREFQ86V81 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ALYREFQ86V81 PCGF3-213ENST00000620529 1899 ntBASIC16.19■□□□□ 0.18
ALYREFQ86V81 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALYREFQ86V81 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ALYREFQ86V81 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.19■□□□□ 0.18
ALYREFQ86V81 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.19■□□□□ 0.18
ALYREFQ86V81 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALYREFQ86V81 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALYREFQ86V81 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALYREFQ86V81 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ALYREFQ86V81 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ALYREFQ86V81 AL355864.2-201ENST00000447420 863 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms