Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 AC015911.4-201ENST00000588022 1070 ntBASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 AC105206.1-202ENST00000314927 2368 ntBASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 AL592424.1-201ENST00000563624 1536 ntBASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 AC012569.1-201ENST00000591191 1524 ntBASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 AKAP8P1-201ENST00000434743 1349 ntBASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
FOXR1Q6PIV2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 AC002472.2-201ENST00000442739 958 ntBASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 SLC25A39P2-201ENST00000537614 270 ntBASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 AC051619.7-201ENST00000568314 623 ntBASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 MIR6080-201ENST00000617359 66 ntBASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 AP001059.3-201ENST00000619053 235 ntBASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXR1Q6PIV2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 UGT1A2P-201ENST00000454886 866 ntBASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms