Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
C11orf88Q6PI97 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 RPS8P6-201ENST00000426177 609 ntBASIC13.56□□□□□ -0.24
C11orf88Q6PI97 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 RHOQP3-201ENST00000437982 621 ntBASIC13.56□□□□□ -0.24
C11orf88Q6PI97 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
C11orf88Q6PI97 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 FGD5P1-202ENST00000614866 2498 ntBASIC13.55□□□□□ -0.24
C11orf88Q6PI97 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 HAUS4P1-201ENST00000406739 1145 ntBASIC13.55□□□□□ -0.24
C11orf88Q6PI97 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 OR7E47P-204ENST00000575924 449 ntBASIC13.55□□□□□ -0.24
C11orf88Q6PI97 AC005412.3-201ENST00000580309 715 ntBASIC13.55□□□□□ -0.24
C11orf88Q6PI97 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 AC129492.6-201ENST00000611383 1305 ntBASIC13.55□□□□□ -0.24
C11orf88Q6PI97 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.55□□□□□ -0.24
C11orf88Q6PI97 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C11orf88Q6PI97 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms