Protein–RNA interactions for Protein: Q06455

RUNX1T1, Protein CBFA2T1, humanhuman

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1Q06455 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RUNX1T1Q06455 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RUNX1T1Q06455 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 UXT-AS1-201ENST00000590504 1525 ntBASIC14.36□□□□□ -0.11
RUNX1T1Q06455 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 RNA5SP410-201ENST00000516285 106 ntBASIC14.36□□□□□ -0.11
RUNX1T1Q06455 RFPL4AP1-201ENST00000530883 850 ntBASIC14.36□□□□□ -0.11
RUNX1T1Q06455 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 AC022145.2-201ENST00000598203 171 ntBASIC14.36□□□□□ -0.11
RUNX1T1Q06455 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RUNX1T1Q06455 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 CICP14-201ENST00000629111 2732 ntBASIC14.35□□□□□ -0.11
RUNX1T1Q06455 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 YBX1P5-201ENST00000509441 847 ntBASIC14.35□□□□□ -0.11
RUNX1T1Q06455 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 KRT8P23-201ENST00000560090 1207 ntBASIC14.35□□□□□ -0.11
RUNX1T1Q06455 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 AC011467.4-201ENST00000594891 528 ntBASIC14.35□□□□□ -0.11
RUNX1T1Q06455 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.35□□□□□ -0.11
RUNX1T1Q06455 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms