Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
VBP1P61758 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.87□□□□□ -0.19
VBP1P61758 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
VBP1P61758 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
VBP1P61758 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.87□□□□□ -0.19
VBP1P61758 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.87□□□□□ -0.19
VBP1P61758 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.87□□□□□ -0.19
VBP1P61758 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.87□□□□□ -0.19
VBP1P61758 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VBP1P61758 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
VBP1P61758 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
VBP1P61758 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VBP1P61758 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.86□□□□□ -0.19
VBP1P61758 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.86□□□□□ -0.19
VBP1P61758 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.86□□□□□ -0.19
VBP1P61758 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.86□□□□□ -0.19
VBP1P61758 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.86□□□□□ -0.19
VBP1P61758 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.86□□□□□ -0.19
VBP1P61758 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.86□□□□□ -0.19
VBP1P61758 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VBP1P61758 AC005521.1-201ENST00000393351 872 ntBASIC13.86□□□□□ -0.19
VBP1P61758 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.86□□□□□ -0.19
VBP1P61758 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
VBP1P61758 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VBP1P61758 RPS15P9-201ENST00000494093 319 ntBASIC13.86□□□□□ -0.19
VBP1P61758 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 AC063952.2-201ENST00000498792 1227 ntBASIC13.86□□□□□ -0.19
VBP1P61758 AC106795.1-205ENST00000512851 1056 ntBASIC13.86□□□□□ -0.19
VBP1P61758 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.86□□□□□ -0.19
VBP1P61758 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.86□□□□□ -0.19
VBP1P61758 AC011467.4-201ENST00000594891 528 ntBASIC13.86□□□□□ -0.19
VBP1P61758 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.86□□□□□ -0.19
VBP1P61758 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VBP1P61758 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VBP1P61758 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
VBP1P61758 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VBP1P61758 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.86□□□□□ -0.19
VBP1P61758 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.86□□□□□ -0.19
VBP1P61758 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
VBP1P61758 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.86□□□□□ -0.19
VBP1P61758 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VBP1P61758 AL139385.1-201ENST00000611744 3272 ntBASIC13.86□□□□□ -0.19
VBP1P61758 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.85□□□□□ -0.19
VBP1P61758 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.85□□□□□ -0.19
VBP1P61758 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.85□□□□□ -0.19
VBP1P61758 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
VBP1P61758 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
VBP1P61758 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
VBP1P61758 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
VBP1P61758 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.85□□□□□ -0.19
VBP1P61758 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.85□□□□□ -0.19
VBP1P61758 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.85□□□□□ -0.19
VBP1P61758 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
VBP1P61758 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
VBP1P61758 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.85□□□□□ -0.19
VBP1P61758 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.85□□□□□ -0.19
VBP1P61758 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.85□□□□□ -0.19
VBP1P61758 RPL5P21-201ENST00000404620 815 ntBASIC13.85□□□□□ -0.19
VBP1P61758 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
VBP1P61758 AP002383.4-201ENST00000442518 975 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms