Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERFP50548 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ERFP50548 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERFP50548 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ERFP50548 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERFP50548 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERFP50548 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.96□□□□□ -0.01
ERFP50548 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
ERFP50548 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERFP50548 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.96□□□□□ -0.01
ERFP50548 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.96□□□□□ -0.01
ERFP50548 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.96□□□□□ -0.01
ERFP50548 RBM17P3-201ENST00000417687 1192 ntBASIC14.96□□□□□ -0.01
ERFP50548 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ERFP50548 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERFP50548 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.96□□□□□ -0.01
ERFP50548 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.96□□□□□ -0.01
ERFP50548 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.96□□□□□ -0.01
ERFP50548 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.96□□□□□ -0.01
ERFP50548 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ERFP50548 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.96□□□□□ -0.01
ERFP50548 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ERFP50548 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERFP50548 REXO1L6P-202ENST00000619970 1078 ntBASIC14.96□□□□□ -0.01
ERFP50548 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.96□□□□□ -0.01
ERFP50548 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ERFP50548 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERFP50548 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERFP50548 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERFP50548 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ERFP50548 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ERFP50548 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ERFP50548 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ERFP50548 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ERFP50548 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.96□□□□□ -0.02
ERFP50548 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ERFP50548 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
ERFP50548 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ERFP50548 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ERFP50548 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.96□□□□□ -0.02
ERFP50548 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.96□□□□□ -0.02
ERFP50548 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ERFP50548 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.95□□□□□ -0.02
ERFP50548 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
ERFP50548 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
ERFP50548 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
ERFP50548 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.95□□□□□ -0.02
ERFP50548 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.95□□□□□ -0.02
ERFP50548 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ERFP50548 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.95□□□□□ -0.02
ERFP50548 AF238378.1-201ENST00000526806 358 ntBASIC14.95□□□□□ -0.02
ERFP50548 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.95□□□□□ -0.02
ERFP50548 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.95□□□□□ -0.02
ERFP50548 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.95□□□□□ -0.02
ERFP50548 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
ERFP50548 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.95□□□□□ -0.02
ERFP50548 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ERFP50548 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
ERFP50548 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.95□□□□□ -0.02
ERFP50548 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.95□□□□□ -0.02
ERFP50548 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.95□□□□□ -0.02
ERFP50548 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.95□□□□□ -0.02
ERFP50548 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
ERFP50548 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.95□□□□□ -0.02
ERFP50548 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.95□□□□□ -0.02
ERFP50548 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
ERFP50548 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
ERFP50548 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ERFP50548 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.94□□□□□ -0.02
ERFP50548 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.94□□□□□ -0.02
ERFP50548 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.94□□□□□ -0.02
ERFP50548 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ERFP50548 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
ERFP50548 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ERFP50548 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ERFP50548 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.94□□□□□ -0.02
ERFP50548 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ERFP50548 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms