Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
HOXC12P31275 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
HOXC12P31275 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HOXC12P31275 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.72□□□□□ -0.21
HOXC12P31275 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 AL133267.1-201ENST00000398220 340 ntBASIC13.72□□□□□ -0.21
HOXC12P31275 TOMM22P5-201ENST00000416399 439 ntBASIC13.72□□□□□ -0.21
HOXC12P31275 AC098850.1-201ENST00000419919 790 ntBASIC13.72□□□□□ -0.21
HOXC12P31275 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.72□□□□□ -0.21
HOXC12P31275 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.72□□□□□ -0.21
HOXC12P31275 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.72□□□□□ -0.21
HOXC12P31275 BNIP3P42-201ENST00000454982 569 ntBASIC13.72□□□□□ -0.21
HOXC12P31275 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.72□□□□□ -0.21
HOXC12P31275 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.72□□□□□ -0.21
HOXC12P31275 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.72□□□□□ -0.21
HOXC12P31275 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.72□□□□□ -0.21
HOXC12P31275 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.72□□□□□ -0.21
HOXC12P31275 AC008735.3-201ENST00000596646 500 ntBASIC13.72□□□□□ -0.21
HOXC12P31275 BNIP3P29-201ENST00000598302 571 ntBASIC13.72□□□□□ -0.21
HOXC12P31275 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.72□□□□□ -0.21
HOXC12P31275 TMEM261P1-201ENST00000604899 340 ntBASIC13.72□□□□□ -0.21
HOXC12P31275 WFDC1-204ENST00000613603 549 ntBASIC13.72□□□□□ -0.21
HOXC12P31275 AC011447.5-201ENST00000616168 564 ntBASIC13.72□□□□□ -0.21
HOXC12P31275 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HOXC12P31275 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 PCDHA1-201ENST00000378133 2726 ntBASIC13.72□□□□□ -0.21
HOXC12P31275 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.72□□□□□ -0.21
HOXC12P31275 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.72□□□□□ -0.21
HOXC12P31275 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.72□□□□□ -0.21
HOXC12P31275 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.72□□□□□ -0.21
HOXC12P31275 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC12P31275 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
HOXC12P31275 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC12P31275 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HOXC12P31275 LINC02199-201ENST00000506655 2702 ntBASIC13.71□□□□□ -0.21
HOXC12P31275 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC12P31275 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.71□□□□□ -0.21
HOXC12P31275 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC12P31275 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.71□□□□□ -0.21
HOXC12P31275 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HOXC12P31275 AC103702.1-201ENST00000548801 2630 ntBASIC13.71□□□□□ -0.21
HOXC12P31275 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.71□□□□□ -0.21
HOXC12P31275 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC12P31275 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC12P31275 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC12P31275 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.71□□□□□ -0.21
HOXC12P31275 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC12P31275 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.71□□□□□ -0.21
HOXC12P31275 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.71□□□□□ -0.21
HOXC12P31275 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC12P31275 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.71□□□□□ -0.21
HOXC12P31275 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.71□□□□□ -0.21
HOXC12P31275 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.71□□□□□ -0.21
HOXC12P31275 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.71□□□□□ -0.21
HOXC12P31275 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.71□□□□□ -0.21
HOXC12P31275 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.71□□□□□ -0.21
HOXC12P31275 MIR4313-201ENST00000580760 101 ntBASIC13.71□□□□□ -0.21
HOXC12P31275 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.71□□□□□ -0.21
HOXC12P31275 AL033527.5-201ENST00000641382 801 ntBASIC13.71□□□□□ -0.21
HOXC12P31275 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC12P31275 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.71□□□□□ -0.21
HOXC12P31275 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
HOXC12P31275 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
HOXC12P31275 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HOXC12P31275 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.71□□□□□ -0.22
HOXC12P31275 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.71□□□□□ -0.22
HOXC12P31275 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.71□□□□□ -0.22
HOXC12P31275 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
HOXC12P31275 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HOXC12P31275 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms