Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SHC1P29353 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.18□□□□□ -0.14
SHC1P29353 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.18□□□□□ -0.14
SHC1P29353 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.18□□□□□ -0.14
SHC1P29353 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SHC1P29353 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SHC1P29353 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SHC1P29353 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SHC1P29353 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
SHC1P29353 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.17□□□□□ -0.14
SHC1P29353 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.17□□□□□ -0.14
SHC1P29353 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.17□□□□□ -0.14
SHC1P29353 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SHC1P29353 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SHC1P29353 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.17□□□□□ -0.14
SHC1P29353 AL359258.3-201ENST00000622910 2331 ntBASIC14.17□□□□□ -0.14
SHC1P29353 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.17□□□□□ -0.14
SHC1P29353 AC015922.1-201ENST00000421102 1152 ntBASIC14.17□□□□□ -0.14
SHC1P29353 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.17□□□□□ -0.14
SHC1P29353 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.17□□□□□ -0.14
SHC1P29353 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.17□□□□□ -0.14
SHC1P29353 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 DOC2GP-202ENST00000514950 1163 ntBASIC14.17□□□□□ -0.14
SHC1P29353 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SHC1P29353 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SHC1P29353 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.17□□□□□ -0.14
SHC1P29353 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.17□□□□□ -0.14
SHC1P29353 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.17□□□□□ -0.14
SHC1P29353 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
SHC1P29353 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.17□□□□□ -0.14
SHC1P29353 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 AC127383.1-201ENST00000444697 1800 ntBASIC14.17□□□□□ -0.14
SHC1P29353 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.17□□□□□ -0.14
SHC1P29353 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SHC1P29353 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SHC1P29353 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.17□□□□□ -0.14
SHC1P29353 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.17□□□□□ -0.14
SHC1P29353 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.17□□□□□ -0.14
SHC1P29353 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SHC1P29353 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SHC1P29353 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 AC139749.1-202ENST00000617529 3139 ntBASIC14.17□□□□□ -0.14
SHC1P29353 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SHC1P29353 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.16□□□□□ -0.14
SHC1P29353 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.16□□□□□ -0.14
SHC1P29353 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SHC1P29353 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.16□□□□□ -0.14
SHC1P29353 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.16□□□□□ -0.14
SHC1P29353 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.16□□□□□ -0.14
SHC1P29353 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SHC1P29353 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SHC1P29353 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms