Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.55■□□□□ 0.24
CD58P19256 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.54■□□□□ 0.24
CD58P19256 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CD58P19256 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.54■□□□□ 0.24
CD58P19256 DRD5P1-201ENST00000456605 1438 ntBASIC16.54■□□□□ 0.24
CD58P19256 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD58P19256 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.54■□□□□ 0.24
CD58P19256 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CD58P19256 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CD58P19256 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD58P19256 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD58P19256 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD58P19256 INTS4P2-202ENST00000614726 2019 ntBASIC16.54■□□□□ 0.24
CD58P19256 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CD58P19256 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.54■□□□□ 0.24
CD58P19256 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD58P19256 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD58P19256 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD58P19256 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD58P19256 DGCR5-201ENST00000399539 862 ntBASIC16.54■□□□□ 0.24
CD58P19256 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD58P19256 AC092552.1-201ENST00000547243 906 ntBASIC16.54■□□□□ 0.24
CD58P19256 TP53TG3HP-202ENST00000569755 579 ntBASIC16.54■□□□□ 0.24
CD58P19256 SPDYE22P-201ENST00000582158 798 ntBASIC16.54■□□□□ 0.24
CD58P19256 BRI3BPP1-201ENST00000594224 787 ntBASIC16.54■□□□□ 0.24
CD58P19256 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.54■□□□□ 0.24
CD58P19256 AC107373.2-201ENST00000607735 490 ntBASIC16.54■□□□□ 0.24
CD58P19256 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD58P19256 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CD58P19256 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD58P19256 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.54■□□□□ 0.24
CD58P19256 LINC02228-204ENST00000642115 2962 ntBASIC16.54■□□□□ 0.24
CD58P19256 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD58P19256 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD58P19256 AC126365.1-201ENST00000578585 1514 ntBASIC16.54■□□□□ 0.24
CD58P19256 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.54■□□□□ 0.24
CD58P19256 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CD58P19256 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD58P19256 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.54■□□□□ 0.24
CD58P19256 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CD58P19256 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD58P19256 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CD58P19256 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.54■□□□□ 0.24
CD58P19256 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.54■□□□□ 0.24
CD58P19256 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CD58P19256 AL359258.3-201ENST00000622910 2331 ntBASIC16.53■□□□□ 0.24
CD58P19256 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CD58P19256 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.53■□□□□ 0.24
CD58P19256 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.53■□□□□ 0.24
CD58P19256 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CD58P19256 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.53■□□□□ 0.24
CD58P19256 AC134915.1-201ENST00000426461 574 ntBASIC16.53■□□□□ 0.24
CD58P19256 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 AL359711.2-201ENST00000563105 872 ntBASIC16.53■□□□□ 0.24
CD58P19256 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.53■□□□□ 0.24
CD58P19256 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.53■□□□□ 0.24
CD58P19256 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.53■□□□□ 0.24
CD58P19256 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CD58P19256 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.53■□□□□ 0.24
CD58P19256 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.53■□□□□ 0.24
CD58P19256 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CD58P19256 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.53■□□□□ 0.24
CD58P19256 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD58P19256 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.53■□□□□ 0.24
CD58P19256 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.53■□□□□ 0.24
CD58P19256 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD58P19256 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD58P19256 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD58P19256 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CD58P19256 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD58P19256 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD58P19256 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
CD58P19256 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD58P19256 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CD58P19256 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD58P19256 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD58P19256 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD58P19256 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD58P19256 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.52■□□□□ 0.24
CD58P19256 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CD58P19256 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD58P19256 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.52■□□□□ 0.24
CD58P19256 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CD58P19256 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms