Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
NCK1P16333 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCK1P16333 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NCK1P16333 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCK1P16333 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCK1P16333 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NCK1P16333 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCK1P16333 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.62□□□□□ -0.07
NCK1P16333 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCK1P16333 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCK1P16333 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCK1P16333 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NCK1P16333 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.62□□□□□ -0.07
NCK1P16333 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.62□□□□□ -0.07
NCK1P16333 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.61□□□□□ -0.07
NCK1P16333 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.61□□□□□ -0.07
NCK1P16333 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.61□□□□□ -0.07
NCK1P16333 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
NCK1P16333 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.61□□□□□ -0.07
NCK1P16333 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
NCK1P16333 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.61□□□□□ -0.07
NCK1P16333 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.61□□□□□ -0.07
NCK1P16333 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.61□□□□□ -0.07
NCK1P16333 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.61□□□□□ -0.07
NCK1P16333 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.61□□□□□ -0.07
NCK1P16333 AC026979.3-201ENST00000607315 403 ntBASIC14.61□□□□□ -0.07
NCK1P16333 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.61□□□□□ -0.07
NCK1P16333 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.61□□□□□ -0.07
NCK1P16333 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
NCK1P16333 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.61□□□□□ -0.07
NCK1P16333 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
NCK1P16333 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
NCK1P16333 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.61□□□□□ -0.07
NCK1P16333 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NCK1P16333 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.6□□□□□ -0.07
NCK1P16333 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NCK1P16333 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.6□□□□□ -0.07
NCK1P16333 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
NCK1P16333 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NCK1P16333 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
NCK1P16333 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.6□□□□□ -0.07
NCK1P16333 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NCK1P16333 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NCK1P16333 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.6□□□□□ -0.07
NCK1P16333 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.6□□□□□ -0.07
NCK1P16333 GHSR-202ENST00000427970 912 ntBASIC14.6□□□□□ -0.07
NCK1P16333 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.6□□□□□ -0.07
NCK1P16333 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.6□□□□□ -0.07
NCK1P16333 AC011467.4-201ENST00000594891 528 ntBASIC14.6□□□□□ -0.07
NCK1P16333 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NCK1P16333 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
NCK1P16333 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NCK1P16333 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.6□□□□□ -0.07
NCK1P16333 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.6□□□□□ -0.07
NCK1P16333 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.6□□□□□ -0.07
NCK1P16333 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NCK1P16333 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms