Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.19■□□□□ 0.18
RARAP10276 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RARAP10276 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RARAP10276 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RARAP10276 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RARAP10276 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RARAP10276 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.19■□□□□ 0.18
RARAP10276 AC138969.3-201ENST00000546612 1459 ntBASIC16.19■□□□□ 0.18
RARAP10276 AC138932.2-201ENST00000548268 1459 ntBASIC16.19■□□□□ 0.18
RARAP10276 AC126755.4-201ENST00000549796 1459 ntBASIC16.19■□□□□ 0.18
RARAP10276 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.19■□□□□ 0.18
RARAP10276 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.19■□□□□ 0.18
RARAP10276 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
RARAP10276 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.19■□□□□ 0.18
RARAP10276 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.19■□□□□ 0.18
RARAP10276 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.19■□□□□ 0.18
RARAP10276 AC106028.4-201ENST00000614509 607 ntBASIC16.19■□□□□ 0.18
RARAP10276 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.19■□□□□ 0.18
RARAP10276 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.19■□□□□ 0.18
RARAP10276 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.19■□□□□ 0.18
RARAP10276 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RARAP10276 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.19■□□□□ 0.18
RARAP10276 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.19■□□□□ 0.18
RARAP10276 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.19■□□□□ 0.18
RARAP10276 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RARAP10276 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.18■□□□□ 0.18
RARAP10276 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RARAP10276 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.18■□□□□ 0.18
RARAP10276 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 AP000845.1-201ENST00000581677 2131 ntBASIC16.18■□□□□ 0.18
RARAP10276 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.18■□□□□ 0.18
RARAP10276 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RARAP10276 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.18■□□□□ 0.18
RARAP10276 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.18■□□□□ 0.18
RARAP10276 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.18■□□□□ 0.18
RARAP10276 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.18■□□□□ 0.18
RARAP10276 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.18■□□□□ 0.18
RARAP10276 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.18■□□□□ 0.18
RARAP10276 KRT18P43-201ENST00000469825 1281 ntBASIC16.18■□□□□ 0.18
RARAP10276 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.18■□□□□ 0.18
RARAP10276 AC004890.2-204ENST00000481968 304 ntBASIC16.18■□□□□ 0.18
RARAP10276 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.18■□□□□ 0.18
RARAP10276 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.18■□□□□ 0.18
RARAP10276 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.18■□□□□ 0.18
RARAP10276 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.18■□□□□ 0.18
RARAP10276 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 REXO1L2P-201ENST00000425429 2069 ntBASIC16.18■□□□□ 0.18
RARAP10276 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 AC140479.7-201ENST00000636301 2332 ntBASIC16.18■□□□□ 0.18
RARAP10276 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.18■□□□□ 0.18
RARAP10276 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RARAP10276 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RARAP10276 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RARAP10276 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RARAP10276 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
RARAP10276 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RARAP10276 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.17■□□□□ 0.18
RARAP10276 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.17■□□□□ 0.18
RARAP10276 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.17■□□□□ 0.18
RARAP10276 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RARAP10276 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.17■□□□□ 0.18
RARAP10276 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.17■□□□□ 0.18
RARAP10276 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RARAP10276 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms