Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HTR1AP08908 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HTR1AP08908 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HTR1AP08908 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HTR1AP08908 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HTR1AP08908 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.1□□□□□ -0.15
HTR1AP08908 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.1□□□□□ -0.15
HTR1AP08908 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.1□□□□□ -0.15
HTR1AP08908 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.1□□□□□ -0.15
HTR1AP08908 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HTR1AP08908 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.1□□□□□ -0.15
HTR1AP08908 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HTR1AP08908 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HTR1AP08908 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HTR1AP08908 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HTR1AP08908 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HTR1AP08908 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
HTR1AP08908 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HTR1AP08908 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HTR1AP08908 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HTR1AP08908 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.09□□□□□ -0.15
HTR1AP08908 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HTR1AP08908 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
HTR1AP08908 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.09□□□□□ -0.15
HTR1AP08908 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.09□□□□□ -0.15
HTR1AP08908 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
HTR1AP08908 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HTR1AP08908 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.09□□□□□ -0.15
HTR1AP08908 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.09□□□□□ -0.15
HTR1AP08908 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.09□□□□□ -0.15
HTR1AP08908 RHOQP3-201ENST00000437982 621 ntBASIC14.09□□□□□ -0.15
HTR1AP08908 AC140658.5-201ENST00000438532 169 ntBASIC14.09□□□□□ -0.15
HTR1AP08908 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.09□□□□□ -0.15
HTR1AP08908 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.09□□□□□ -0.15
HTR1AP08908 AC061975.2-201ENST00000581722 295 ntBASIC14.09□□□□□ -0.15
HTR1AP08908 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.09□□□□□ -0.15
HTR1AP08908 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
HTR1AP08908 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HTR1AP08908 AC023090.2-201ENST00000625182 2110 ntBASIC14.09□□□□□ -0.15
HTR1AP08908 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
HTR1AP08908 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.09□□□□□ -0.15
HTR1AP08908 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
HTR1AP08908 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.09□□□□□ -0.15
HTR1AP08908 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HTR1AP08908 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.09□□□□□ -0.15
HTR1AP08908 AC084364.1-201ENST00000551967 1556 ntBASIC14.09□□□□□ -0.15
HTR1AP08908 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HTR1AP08908 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.08□□□□□ -0.15
HTR1AP08908 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.08□□□□□ -0.15
HTR1AP08908 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.08□□□□□ -0.15
HTR1AP08908 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
HTR1AP08908 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HTR1AP08908 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HTR1AP08908 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HTR1AP08908 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HTR1AP08908 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HTR1AP08908 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HTR1AP08908 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HTR1AP08908 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HTR1AP08908 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HTR1AP08908 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HTR1AP08908 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.08□□□□□ -0.16
HTR1AP08908 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HTR1AP08908 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.08□□□□□ -0.16
HTR1AP08908 AC004987.2-201ENST00000395959 1148 ntBASIC14.08□□□□□ -0.16
HTR1AP08908 GHSR-202ENST00000427970 912 ntBASIC14.08□□□□□ -0.16
HTR1AP08908 AC009947.1-201ENST00000444350 727 ntBASIC14.08□□□□□ -0.16
HTR1AP08908 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.08□□□□□ -0.16
HTR1AP08908 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.08□□□□□ -0.16
HTR1AP08908 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
HTR1AP08908 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.08□□□□□ -0.16
HTR1AP08908 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.08□□□□□ -0.16
HTR1AP08908 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.08□□□□□ -0.16
HTR1AP08908 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.08□□□□□ -0.16
HTR1AP08908 AL773604.1-201ENST00000617417 272 ntBASIC14.08□□□□□ -0.16
HTR1AP08908 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.08□□□□□ -0.16
HTR1AP08908 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
HTR1AP08908 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HTR1AP08908 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
HTR1AP08908 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HTR1AP08908 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HTR1AP08908 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HTR1AP08908 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms