Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TPM2P07951 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.64■□□□□ 0.41
TPM2P07951 AC018845.2-201ENST00000568326 409 ntBASIC17.64■□□□□ 0.41
TPM2P07951 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.64■□□□□ 0.41
TPM2P07951 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TPM2P07951 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM2P07951 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM2P07951 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM2P07951 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TPM2P07951 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TPM2P07951 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM2P07951 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM2P07951 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM2P07951 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
TPM2P07951 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TPM2P07951 AC104109.2-201ENST00000602919 1418 ntBASIC17.64■□□□□ 0.41
TPM2P07951 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
TPM2P07951 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM2P07951 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM2P07951 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM2P07951 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TPM2P07951 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM2P07951 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TPM2P07951 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.63■□□□□ 0.41
TPM2P07951 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TPM2P07951 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
TPM2P07951 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
TPM2P07951 AC074386.1-202ENST00000463561 864 ntBASIC17.63■□□□□ 0.41
TPM2P07951 AC098859.1-201ENST00000502915 1238 ntBASIC17.63■□□□□ 0.41
TPM2P07951 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TPM2P07951 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TPM2P07951 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
TPM2P07951 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TPM2P07951 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM2P07951 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TPM2P07951 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.63■□□□□ 0.41
TPM2P07951 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.63■□□□□ 0.41
TPM2P07951 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 AC105250.1-201ENST00000509378 2057 ntBASIC17.63■□□□□ 0.41
TPM2P07951 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.63■□□□□ 0.41
TPM2P07951 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TPM2P07951 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.63■□□□□ 0.41
TPM2P07951 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM2P07951 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TPM2P07951 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM2P07951 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM2P07951 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TPM2P07951 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
TPM2P07951 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM2P07951 NUTM2HP-201ENST00000442076 2498 ntBASIC17.62■□□□□ 0.41
TPM2P07951 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.62■□□□□ 0.41
TPM2P07951 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TPM2P07951 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM2P07951 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.62■□□□□ 0.41
TPM2P07951 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.62■□□□□ 0.41
TPM2P07951 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM2P07951 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TPM2P07951 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.62■□□□□ 0.41
TPM2P07951 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TPM2P07951 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.62■□□□□ 0.41
TPM2P07951 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TPM2P07951 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TPM2P07951 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM2P07951 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM2P07951 GPX1P2-201ENST00000429271 606 ntBASIC17.62■□□□□ 0.41
TPM2P07951 TPM4P1-201ENST00000436100 807 ntBASIC17.62■□□□□ 0.41
TPM2P07951 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.62■□□□□ 0.41
TPM2P07951 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.62■□□□□ 0.41
TPM2P07951 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.62■□□□□ 0.41
TPM2P07951 SLC25A6P4-201ENST00000586535 553 ntBASIC17.62■□□□□ 0.41
TPM2P07951 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM2P07951 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM2P07951 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM2P07951 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM2P07951 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM2P07951 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM2P07951 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TPM2P07951 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.62■□□□□ 0.41
TPM2P07951 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM2P07951 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TPM2P07951 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms