Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.49□□□□□ -0.09
PDGFAP04085 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.49□□□□□ -0.09
PDGFAP04085 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 GOLGA2P4-201ENST00000441462 777 ntBASIC14.49□□□□□ -0.09
PDGFAP04085 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.49□□□□□ -0.09
PDGFAP04085 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.49□□□□□ -0.09
PDGFAP04085 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.49□□□□□ -0.09
PDGFAP04085 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
PDGFAP04085 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
PDGFAP04085 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.49□□□□□ -0.09
PDGFAP04085 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.49□□□□□ -0.09
PDGFAP04085 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.49□□□□□ -0.09
PDGFAP04085 AL592424.1-201ENST00000563624 1536 ntBASIC14.49□□□□□ -0.09
PDGFAP04085 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.49□□□□□ -0.09
PDGFAP04085 AL122018.1-201ENST00000446607 2310 ntBASIC14.49□□□□□ -0.09
PDGFAP04085 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.49□□□□□ -0.09
PDGFAP04085 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PDGFAP04085 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.49□□□□□ -0.09
PDGFAP04085 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.49□□□□□ -0.09
PDGFAP04085 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PDGFAP04085 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDGFAP04085 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.48□□□□□ -0.09
PDGFAP04085 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 AC134312.5-201ENST00000568031 1313 ntBASIC14.48□□□□□ -0.09
PDGFAP04085 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 AC078925.2-201ENST00000624013 1973 ntBASIC14.48□□□□□ -0.09
PDGFAP04085 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 MIR1247-201ENST00000408206 136 ntBASIC14.48□□□□□ -0.09
PDGFAP04085 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.48□□□□□ -0.09
PDGFAP04085 AC012441.1-201ENST00000446669 685 ntBASIC14.48□□□□□ -0.09
PDGFAP04085 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 AC093433.1-201ENST00000458048 571 ntBASIC14.48□□□□□ -0.09
PDGFAP04085 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.48□□□□□ -0.09
PDGFAP04085 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.48□□□□□ -0.09
PDGFAP04085 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.48□□□□□ -0.09
PDGFAP04085 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.48□□□□□ -0.09
PDGFAP04085 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
PDGFAP04085 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
PDGFAP04085 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.48□□□□□ -0.09
PDGFAP04085 C2orf69P2-201ENST00000562032 1123 ntBASIC14.48□□□□□ -0.09
PDGFAP04085 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.48□□□□□ -0.09
PDGFAP04085 AC010328.2-201ENST00000597698 1111 ntBASIC14.48□□□□□ -0.09
PDGFAP04085 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.48□□□□□ -0.09
PDGFAP04085 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.48□□□□□ -0.09
PDGFAP04085 AL139099.5-201ENST00000635274 300 ntBASIC14.48□□□□□ -0.09
PDGFAP04085 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.48□□□□□ -0.09
PDGFAP04085 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.48□□□□□ -0.09
PDGFAP04085 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.48□□□□□ -0.09
PDGFAP04085 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PDGFAP04085 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.48□□□□□ -0.09
PDGFAP04085 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PDGFAP04085 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.48□□□□□ -0.09
PDGFAP04085 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDGFAP04085 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.48□□□□□ -0.09
PDGFAP04085 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
PDGFAP04085 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.47□□□□□ -0.09
PDGFAP04085 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PDGFAP04085 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.47□□□□□ -0.09
PDGFAP04085 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PDGFAP04085 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.47□□□□□ -0.09
PDGFAP04085 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PDGFAP04085 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms