Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM3O75382 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TRIM3O75382 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM3O75382 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
TRIM3O75382 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM3O75382 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 MEP1AP4-201ENST00000423244 1087 ntBASIC14.44□□□□□ -0.1
TRIM3O75382 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM3O75382 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM3O75382 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRIM3O75382 MEIS3P1-201ENST00000495167 958 ntBASIC14.44□□□□□ -0.1
TRIM3O75382 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM3O75382 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM3O75382 TPRX2P-201ENST00000535362 881 ntBASIC14.44□□□□□ -0.1
TRIM3O75382 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM3O75382 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRIM3O75382 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.44□□□□□ -0.1
TRIM3O75382 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.44□□□□□ -0.1
TRIM3O75382 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM3O75382 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.44□□□□□ -0.1
TRIM3O75382 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM3O75382 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRIM3O75382 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.43□□□□□ -0.1
TRIM3O75382 AL137784.3-201ENST00000623858 2288 ntBASIC14.43□□□□□ -0.1
TRIM3O75382 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM3O75382 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM3O75382 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
TRIM3O75382 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM3O75382 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM3O75382 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.43□□□□□ -0.1
TRIM3O75382 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM3O75382 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.43□□□□□ -0.1
TRIM3O75382 AC055876.2-201ENST00000531834 546 ntBASIC14.43□□□□□ -0.1
TRIM3O75382 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
TRIM3O75382 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
TRIM3O75382 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM3O75382 AC023310.3-201ENST00000557027 670 ntBASIC14.43□□□□□ -0.1
TRIM3O75382 AC100756.1-201ENST00000562736 682 ntBASIC14.43□□□□□ -0.1
TRIM3O75382 AC138749.3-201ENST00000567691 622 ntBASIC14.43□□□□□ -0.1
TRIM3O75382 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM3O75382 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.43□□□□□ -0.1
TRIM3O75382 AC027307.3-201ENST00000594262 1100 ntBASIC14.43□□□□□ -0.1
TRIM3O75382 AC116165.1-201ENST00000611806 668 ntBASIC14.43□□□□□ -0.1
TRIM3O75382 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.43□□□□□ -0.1
TRIM3O75382 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 AF228730.6-201ENST00000641497 218 ntBASIC14.43□□□□□ -0.1
TRIM3O75382 AC084121.3-201ENST00000641716 218 ntBASIC14.43□□□□□ -0.1
TRIM3O75382 AC105233.6-201ENST00000642093 218 ntBASIC14.43□□□□□ -0.1
TRIM3O75382 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM3O75382 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM3O75382 SLC7A15P-201ENST00000424028 1363 ntBASIC14.43□□□□□ -0.1
TRIM3O75382 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM3O75382 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRIM3O75382 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRIM3O75382 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms