Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 ELK1P1-201ENST00000485699 580 ntBASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 MIR4745-201ENST00000577608 62 ntBASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 AL157414.3-201ENST00000624276 1954 ntBASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPB9F8W1W9 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 PIN1P1-201ENST00000412108 996 ntBASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 NUS1P3-201ENST00000423502 862 ntBASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 MYCLP2-201ENST00000449268 967 ntBASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NPIPB9F8W1W9 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 AC190387.1-201ENST00000551683 408 ntBASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 SPDYE22P-201ENST00000582158 798 ntBASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 CTBP2P3-201ENST00000585629 1255 ntBASIC14.03□□□□□ -0.16
NPIPB9F8W1W9 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms