Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 AC126365.1-201ENST00000578585 1514 ntBASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 HTR5BP-201ENST00000430851 1154 ntBASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 DNAJB3-201ENST00000446806 729 ntBASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 PGAM5P1-201ENST00000518923 814 ntBASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HTR3EA5X5Y0 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 UXT-AS1-201ENST00000590504 1525 ntBASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 TIMM8BP1-201ENST00000452384 211 ntBASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 AC136621.1-201ENST00000624017 2304 ntBASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3EA5X5Y0 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HTR3EA5X5Y0 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.36□□□□□ -0.11
HTR3EA5X5Y0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
HTR3EA5X5Y0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3EA5X5Y0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3EA5X5Y0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.36□□□□□ -0.11
HTR3EA5X5Y0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3EA5X5Y0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3EA5X5Y0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HTR3EA5X5Y0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HTR3EA5X5Y0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.36□□□□□ -0.11
HTR3EA5X5Y0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.36□□□□□ -0.11
HTR3EA5X5Y0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms