Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HFM1A2PYH4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
HFM1A2PYH4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC22.4■■□□□ 1.18
HFM1A2PYH4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
HFM1A2PYH4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HFM1A2PYH4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
HFM1A2PYH4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
HFM1A2PYH4 AL354877.1-201ENST00000424412 413 ntBASIC22.4■■□□□ 1.18
HFM1A2PYH4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC22.4■■□□□ 1.18
HFM1A2PYH4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC22.4■■□□□ 1.18
HFM1A2PYH4 RN7SL219P-201ENST00000582872 296 ntBASIC22.4■■□□□ 1.18
HFM1A2PYH4 AP001002.3-201ENST00000623482 206 ntBASIC22.4■■□□□ 1.18
HFM1A2PYH4 ABBA01031663.1-201ENST00000635630 790 ntBASIC22.4■■□□□ 1.18
HFM1A2PYH4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
HFM1A2PYH4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
HFM1A2PYH4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
HFM1A2PYH4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
HFM1A2PYH4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HFM1A2PYH4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC22.39■■□□□ 1.18
HFM1A2PYH4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
HFM1A2PYH4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
HFM1A2PYH4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
HFM1A2PYH4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
HFM1A2PYH4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HFM1A2PYH4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
HFM1A2PYH4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
HFM1A2PYH4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.18
HFM1A2PYH4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HFM1A2PYH4 AC020910.5-201ENST00000623668 1865 ntBASIC22.39■■□□□ 1.17
HFM1A2PYH4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC22.39■■□□□ 1.17
HFM1A2PYH4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HFM1A2PYH4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HFM1A2PYH4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
HFM1A2PYH4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC22.39■■□□□ 1.17
HFM1A2PYH4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HFM1A2PYH4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC22.39■■□□□ 1.17
HFM1A2PYH4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HFM1A2PYH4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.17
HFM1A2PYH4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
HFM1A2PYH4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
HFM1A2PYH4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HFM1A2PYH4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HFM1A2PYH4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC22.39■■□□□ 1.17
HFM1A2PYH4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC22.39■■□□□ 1.17
HFM1A2PYH4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC22.39■■□□□ 1.17
HFM1A2PYH4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC22.39■■□□□ 1.17
HFM1A2PYH4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HFM1A2PYH4 GPR182-203ENST00000622922 591 ntBASIC22.39■■□□□ 1.17
HFM1A2PYH4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HFM1A2PYH4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HFM1A2PYH4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
HFM1A2PYH4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
HFM1A2PYH4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HFM1A2PYH4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HFM1A2PYH4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HFM1A2PYH4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HFM1A2PYH4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
HFM1A2PYH4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HFM1A2PYH4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
HFM1A2PYH4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
HFM1A2PYH4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HFM1A2PYH4 NME6-203ENST00000415644 849 ntTSL 2 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HFM1A2PYH4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HFM1A2PYH4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HFM1A2PYH4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
HFM1A2PYH4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HFM1A2PYH4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC22.38■■□□□ 1.17
HFM1A2PYH4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HFM1A2PYH4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HFM1A2PYH4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HFM1A2PYH4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HFM1A2PYH4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HFM1A2PYH4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
HFM1A2PYH4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HFM1A2PYH4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HFM1A2PYH4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
HFM1A2PYH4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC22.37■■□□□ 1.17
HFM1A2PYH4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HFM1A2PYH4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC22.37■■□□□ 1.17
HFM1A2PYH4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HFM1A2PYH4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms