Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 AC015656.1-201ENST00000624209 3578 ntBASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 LINC01230-201ENST00000625222 3017 ntBASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2D4Q9Y2X8 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 AC027601.5-201ENST00000624065 2482 ntBASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 SPCS2P4-201ENST00000436160 681 ntBASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 IGHV3-62-201ENST00000520057 340 ntBASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 AC091812.2-201ENST00000619081 385 ntBASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2D4Q9Y2X8 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 AC018529.2-202ENST00000611482 3087 ntBASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 SLC9A7P1-202ENST00000556476 2239 ntBASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D4Q9Y2X8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms