Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 TNFAIP3-211ENST00000621150 1613 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 AC136285.1-201ENST00000566092 1447 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 RNU6-867P-201ENST00000364956 107 ntBASIC18.6■□□□□ 0.57
RNF216Q9NWF9 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 FAM153A-202ENST00000393518 1138 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 AMZ2P2-201ENST00000406819 1057 ntBASIC18.6■□□□□ 0.57
RNF216Q9NWF9 LINC00525-201ENST00000412730 1188 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 MTND4P28-201ENST00000426217 387 ntBASIC18.6■□□□□ 0.57
RNF216Q9NWF9 MTND5P8-201ENST00000449817 1083 ntBASIC18.6■□□□□ 0.57
RNF216Q9NWF9 NDUFA12P1-201ENST00000455914 406 ntBASIC18.6■□□□□ 0.57
RNF216Q9NWF9 AC087163.2-201ENST00000457299 853 ntBASIC18.6■□□□□ 0.57
RNF216Q9NWF9 AF279873.2-201ENST00000468681 744 ntBASIC18.6■□□□□ 0.57
RNF216Q9NWF9 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 EEF1B2P4-201ENST00000551398 348 ntBASIC18.6■□□□□ 0.57
RNF216Q9NWF9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 AC079148.1-201ENST00000565944 819 ntBASIC18.6■□□□□ 0.57
RNF216Q9NWF9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 CXCL17-202ENST00000601181 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 ACTG1P22-202ENST00000605503 859 ntTSL 4 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF216Q9NWF9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 MS4A3-202ENST00000358152 1516 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 OR5D14-201ENST00000335605 945 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 PHF6-203ENST00000370800 1150 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 MIR770-201ENST00000390219 98 ntBASIC18.59■□□□□ 0.57
RNF216Q9NWF9 GSTA7P-201ENST00000438425 448 ntBASIC18.59■□□□□ 0.57
RNF216Q9NWF9 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RNF216Q9NWF9 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms