Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 AC010336.2-201ENST00000564226 506 ntBASIC14.64□□□□□ -0.07
COL21A1Q96P44 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 AC232323.1-201ENST00000540724 2099 ntBASIC14.64□□□□□ -0.07
COL21A1Q96P44 REXO1L5P-201ENST00000622260 2098 ntBASIC14.64□□□□□ -0.07
COL21A1Q96P44 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 AL390755.1-201ENST00000623716 2027 ntBASIC14.63□□□□□ -0.07
COL21A1Q96P44 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 AC136604.1-201ENST00000418535 575 ntBASIC14.63□□□□□ -0.07
COL21A1Q96P44 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 SDHAP3-202ENST00000515467 728 ntBASIC14.63□□□□□ -0.07
COL21A1Q96P44 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 AL355385.1-201ENST00000606123 409 ntBASIC14.63□□□□□ -0.07
COL21A1Q96P44 AL844908.2-201ENST00000609461 460 ntBASIC14.63□□□□□ -0.07
COL21A1Q96P44 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 AC023024.2-201ENST00000623561 1993 ntBASIC14.63□□□□□ -0.07
COL21A1Q96P44 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.63□□□□□ -0.07
COL21A1Q96P44 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
COL21A1Q96P44 AGAP7P-201ENST00000582299 2062 ntBASIC14.62□□□□□ -0.07
COL21A1Q96P44 AGAP14-201ENST00000624701 2060 ntBASIC14.62□□□□□ -0.07
COL21A1Q96P44 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL21A1Q96P44 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL21A1Q96P44 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COL21A1Q96P44 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms