Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 AC233724.13-201ENST00000598383 410 ntBASIC14.62□□□□□ -0.07
TM9SF4Q92544 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TM9SF4Q92544 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
TM9SF4Q92544 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF4Q92544 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF4Q92544 AL592424.1-201ENST00000563624 1536 ntBASIC14.61□□□□□ -0.07
TM9SF4Q92544 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF4Q92544 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF4Q92544 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF4Q92544 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF4Q92544 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF4Q92544 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF4Q92544 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF4Q92544 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF4Q92544 TMEM14DP-201ENST00000422205 345 ntBASIC14.61□□□□□ -0.07
TM9SF4Q92544 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 EEF1DP4-201ENST00000446006 880 ntBASIC14.61□□□□□ -0.07
TM9SF4Q92544 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF4Q92544 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF4Q92544 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF4Q92544 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 AL022328.1-201ENST00000610050 478 ntBASIC14.61□□□□□ -0.07
TM9SF4Q92544 CU634019.7-201ENST00000624153 1185 ntBASIC14.61□□□□□ -0.07
TM9SF4Q92544 FP236241.2-201ENST00000624906 1185 ntBASIC14.61□□□□□ -0.07
TM9SF4Q92544 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF4Q92544 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
TM9SF4Q92544 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF4Q92544 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TM9SF4Q92544 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.6□□□□□ -0.07
TM9SF4Q92544 AL158212.4-201ENST00000624062 1286 ntBASIC14.6□□□□□ -0.07
TM9SF4Q92544 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TM9SF4Q92544 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms