Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 AC018442.1-201ENST00000421439 2061 ntBASIC15.2■□□□□ 0.02
RDH11Q8TC12 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 AC113367.3-201ENST00000508316 1912 ntBASIC15.19■□□□□ 0.02
RDH11Q8TC12 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 AC015922.1-201ENST00000421102 1152 ntBASIC15.19■□□□□ 0.02
RDH11Q8TC12 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 GPS2P2-201ENST00000430745 888 ntBASIC15.19■□□□□ 0.02
RDH11Q8TC12 RBPMS2P1-201ENST00000437762 623 ntBASIC15.19■□□□□ 0.02
RDH11Q8TC12 SPDYE14P-201ENST00000442619 822 ntBASIC15.19■□□□□ 0.02
RDH11Q8TC12 KRT18P43-201ENST00000469825 1281 ntBASIC15.19■□□□□ 0.02
RDH11Q8TC12 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.19■□□□□ 0.02
RDH11Q8TC12 MTHFR-210ENST00000641407 2387 ntBASIC15.19■□□□□ 0.02
RDH11Q8TC12 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RDH11Q8TC12 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RDH11Q8TC12 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RDH11Q8TC12 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.18■□□□□ 0.02
RDH11Q8TC12 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH11Q8TC12 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH11Q8TC12 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
RDH11Q8TC12 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.18■□□□□ 0.02
RDH11Q8TC12 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.18■□□□□ 0.02
RDH11Q8TC12 AC097376.2-205ENST00000610159 5334 ntBASIC15.18■□□□□ 0.02
RDH11Q8TC12 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.18■□□□□ 0.02
RDH11Q8TC12 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH11Q8TC12 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH11Q8TC12 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH11Q8TC12 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
RDH11Q8TC12 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RDH11Q8TC12 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.18■□□□□ 0.02
RDH11Q8TC12 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH11Q8TC12 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.18■□□□□ 0.02
RDH11Q8TC12 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RDH11Q8TC12 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH11Q8TC12 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH11Q8TC12 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RDH11Q8TC12 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH11Q8TC12 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RDH11Q8TC12 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.18■□□□□ 0.02
RDH11Q8TC12 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.18■□□□□ 0.02
RDH11Q8TC12 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms