Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 GRK6P1-201ENST00000400595 1711 ntBASIC14.01□□□□□ -0.17
SHFQ7M4L6 AC041040.2-201ENST00000622926 2899 ntBASIC14.01□□□□□ -0.17
SHFQ7M4L6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 UXT-AS1-201ENST00000590504 1525 ntBASIC14.01□□□□□ -0.17
SHFQ7M4L6 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 MTHFR-210ENST00000641407 2387 ntBASIC14.01□□□□□ -0.17
SHFQ7M4L6 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 TIMM8BP1-201ENST00000452384 211 ntBASIC14.01□□□□□ -0.17
SHFQ7M4L6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 KRT8P48-201ENST00000515599 1220 ntBASIC14.01□□□□□ -0.17
SHFQ7M4L6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 C20orf181-201ENST00000623918 480 ntBASIC14.01□□□□□ -0.17
SHFQ7M4L6 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.01□□□□□ -0.17
SHFQ7M4L6 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHFQ7M4L6 AP3S2-216ENST00000617003 1561 ntBASIC14□□□□□ -0.17
SHFQ7M4L6 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SHFQ7M4L6 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14□□□□□ -0.17
SHFQ7M4L6 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14□□□□□ -0.17
SHFQ7M4L6 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHFQ7M4L6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SHFQ7M4L6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms