Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFWD3Q6PCD5 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 AL442647.2-201ENST00000429864 857 ntBASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 GIMAP3P-201ENST00000495150 836 ntBASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RFWD3Q6PCD5 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 INTS4P2-202ENST00000614726 2019 ntBASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 AC134915.1-201ENST00000426461 574 ntBASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 AC133539.2-201ENST00000604757 467 ntBASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.09■□□□□ 0.17
RFWD3Q6PCD5 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFWD3Q6PCD5 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFWD3Q6PCD5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFWD3Q6PCD5 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFWD3Q6PCD5 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFWD3Q6PCD5 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms