Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC105250.1-201ENST00000509378 2057 ntBASIC16.3■□□□□ 0.2
VARS2Q5ST30 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VARS2Q5ST30 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VARS2Q5ST30 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VARS2Q5ST30 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VARS2Q5ST30 MIR1202-201ENST00000408529 83 ntBASIC16.3■□□□□ 0.2
VARS2Q5ST30 MTND2P9-201ENST00000422293 931 ntBASIC16.3■□□□□ 0.2
VARS2Q5ST30 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 RSL24D1P2-201ENST00000445584 366 ntBASIC16.3■□□□□ 0.2
VARS2Q5ST30 AC108725.1-201ENST00000495472 409 ntBASIC16.3■□□□□ 0.2
VARS2Q5ST30 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VARS2Q5ST30 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VARS2Q5ST30 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VARS2Q5ST30 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VARS2Q5ST30 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VARS2Q5ST30 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VARS2Q5ST30 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
VARS2Q5ST30 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 CD8B2-202ENST00000417670 633 ntBASIC16.29■□□□□ 0.2
VARS2Q5ST30 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 GOLGA2P4-201ENST00000441462 777 ntBASIC16.29■□□□□ 0.2
VARS2Q5ST30 AC099548.2-209ENST00000480264 625 ntBASIC16.29■□□□□ 0.2
VARS2Q5ST30 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.29■□□□□ 0.2
VARS2Q5ST30 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 AC004908.3-201ENST00000610248 625 ntBASIC16.29■□□□□ 0.2
VARS2Q5ST30 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 AL365203.3-201ENST00000609742 2057 ntBASIC16.29■□□□□ 0.2
VARS2Q5ST30 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.29■□□□□ 0.2
VARS2Q5ST30 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VARS2Q5ST30 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 TPM3P8-201ENST00000330554 643 ntBASIC16.28■□□□□ 0.2
VARS2Q5ST30 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARS2Q5ST30 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.28■□□□□ 0.2
VARS2Q5ST30 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms