Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 AC018529.2-202ENST00000611482 3087 ntBASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RSPO1Q2MKA7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 AC007541.1-201ENST00000570282 1469 ntBASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 DFFBP1-201ENST00000433250 979 ntBASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 API5-211ENST00000534695 560 ntTSL 5 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 AC092552.1-201ENST00000547243 906 ntBASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RSPO1Q2MKA7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RSPO1Q2MKA7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms