Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 POM121L10P-201ENST00000436994 1285 ntBASIC18.27■□□□□ 0.52
PDS5AQ29RF7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 AC008894.3-201ENST00000624324 3103 ntBASIC18.27■□□□□ 0.52
PDS5AQ29RF7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 SSR4P1-203ENST00000599569 2260 ntBASIC18.27■□□□□ 0.52
PDS5AQ29RF7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
PDS5AQ29RF7 AP000845.1-201ENST00000581677 2131 ntBASIC18.27■□□□□ 0.51
PDS5AQ29RF7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDS5AQ29RF7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.27■□□□□ 0.51
PDS5AQ29RF7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.27■□□□□ 0.51
PDS5AQ29RF7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDS5AQ29RF7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
PDS5AQ29RF7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
PDS5AQ29RF7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 GPAA1P2-201ENST00000417923 928 ntBASIC18.26■□□□□ 0.51
PDS5AQ29RF7 HIST2H2BB-201ENST00000449108 381 ntBASIC18.26■□□□□ 0.51
PDS5AQ29RF7 AC004898.1-201ENST00000451057 766 ntBASIC18.26■□□□□ 0.51
PDS5AQ29RF7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 WASH3P-207ENST00000560956 1394 ntBASIC18.26■□□□□ 0.51
PDS5AQ29RF7 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.26■□□□□ 0.51
PDS5AQ29RF7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 AC243960.2-201ENST00000600996 747 ntBASIC18.25■□□□□ 0.51
PDS5AQ29RF7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 AL138725.1-201ENST00000407347 1314 ntBASIC18.25■□□□□ 0.51
PDS5AQ29RF7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDS5AQ29RF7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms