Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 AC018845.2-201ENST00000568326 409 ntBASIC14.68□□□□□ -0.06
CHRNB3Q05901 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 AC005840.4-201ENST00000541242 2494 ntBASIC14.68□□□□□ -0.06
CHRNB3Q05901 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CHRNB3Q05901 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB3Q05901 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 ACE3P-201ENST00000423435 1973 ntBASIC14.67□□□□□ -0.06
CHRNB3Q05901 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 AC092183.1-201ENST00000469884 875 ntBASIC14.67□□□□□ -0.06
CHRNB3Q05901 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 AC073389.1-201ENST00000595595 795 ntBASIC14.67□□□□□ -0.06
CHRNB3Q05901 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 AC055717.3-201ENST00000622967 595 ntBASIC14.67□□□□□ -0.06
CHRNB3Q05901 C20orf181-201ENST00000623918 480 ntBASIC14.67□□□□□ -0.06
CHRNB3Q05901 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHRNB3Q05901 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.67□□□□□ -0.06
CHRNB3Q05901 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 BCAR1-209ENST00000546196 1340 ntBASIC14.66□□□□□ -0.06
CHRNB3Q05901 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHRNB3Q05901 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.66□□□□□ -0.06
CHRNB3Q05901 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms