Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATXN3P54252 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATXN3P54252 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
ATXN3P54252 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ATXN3P54252 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATXN3P54252 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATXN3P54252 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
ATXN3P54252 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.86■□□□□ 0.13
ATXN3P54252 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ATXN3P54252 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ATXN3P54252 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
ATXN3P54252 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATXN3P54252 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATXN3P54252 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.86■□□□□ 0.13
ATXN3P54252 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.86■□□□□ 0.13
ATXN3P54252 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
ATXN3P54252 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATXN3P54252 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATXN3P54252 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ATXN3P54252 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATXN3P54252 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATXN3P54252 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.86■□□□□ 0.13
ATXN3P54252 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.86■□□□□ 0.13
ATXN3P54252 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATXN3P54252 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ATXN3P54252 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.85■□□□□ 0.13
ATXN3P54252 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.85■□□□□ 0.13
ATXN3P54252 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.85■□□□□ 0.13
ATXN3P54252 LINC02447-202ENST00000501888 2146 ntBASIC15.85■□□□□ 0.13
ATXN3P54252 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
ATXN3P54252 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
ATXN3P54252 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
ATXN3P54252 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
ATXN3P54252 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
ATXN3P54252 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.85■□□□□ 0.13
ATXN3P54252 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.85■□□□□ 0.13
ATXN3P54252 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
ATXN3P54252 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
ATXN3P54252 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.85■□□□□ 0.13
ATXN3P54252 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.85■□□□□ 0.13
ATXN3P54252 CTBP2P5-201ENST00000454986 1264 ntBASIC15.85■□□□□ 0.13
ATXN3P54252 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.85■□□□□ 0.13
ATXN3P54252 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.85■□□□□ 0.13
ATXN3P54252 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.85■□□□□ 0.13
ATXN3P54252 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.85■□□□□ 0.13
ATXN3P54252 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
ATXN3P54252 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
ATXN3P54252 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
ATXN3P54252 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
ATXN3P54252 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.85■□□□□ 0.13
ATXN3P54252 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 KRT8P44-201ENST00000441609 1350 ntBASIC15.85■□□□□ 0.13
ATXN3P54252 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ATXN3P54252 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.85■□□□□ 0.13
ATXN3P54252 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.85■□□□□ 0.13
ATXN3P54252 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
ATXN3P54252 SNX18-202ENST00000343017 3140 ntBASIC15.85■□□□□ 0.13
ATXN3P54252 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.85■□□□□ 0.13
ATXN3P54252 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ATXN3P54252 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.85■□□□□ 0.13
ATXN3P54252 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.85■□□□□ 0.13
ATXN3P54252 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
ATXN3P54252 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.84■□□□□ 0.13
ATXN3P54252 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATXN3P54252 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATXN3P54252 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.84■□□□□ 0.13
ATXN3P54252 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.84■□□□□ 0.13
ATXN3P54252 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATXN3P54252 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATXN3P54252 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.84■□□□□ 0.13
ATXN3P54252 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATXN3P54252 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.84■□□□□ 0.13
ATXN3P54252 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
ATXN3P54252 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.84■□□□□ 0.13
ATXN3P54252 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATXN3P54252 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
ATXN3P54252 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATXN3P54252 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATXN3P54252 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ATXN3P54252 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ATXN3P54252 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms