Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SLC6A12P48065 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SLC6A12P48065 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 AL645937.2-201ENST00000396808 931 ntBASIC14.84□□□□□ -0.03
SLC6A12P48065 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC6A12P48065 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.84□□□□□ -0.03
SLC6A12P48065 FAM207CP-201ENST00000443486 507 ntBASIC14.84□□□□□ -0.03
SLC6A12P48065 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 TSPY16P-201ENST00000449843 468 ntBASIC14.84□□□□□ -0.03
SLC6A12P48065 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC6A12P48065 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.84□□□□□ -0.03
SLC6A12P48065 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.84□□□□□ -0.03
SLC6A12P48065 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC6A12P48065 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.84□□□□□ -0.03
SLC6A12P48065 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SLC6A12P48065 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC6A12P48065 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC6A12P48065 AL158070.2-201ENST00000623713 1621 ntBASIC14.84□□□□□ -0.03
SLC6A12P48065 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SLC6A12P48065 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
SLC6A12P48065 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC6A12P48065 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC6A12P48065 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SLC6A12P48065 AL157414.3-201ENST00000624276 1954 ntBASIC14.84□□□□□ -0.03
SLC6A12P48065 AL390755.1-201ENST00000623716 2027 ntBASIC14.83□□□□□ -0.03
SLC6A12P48065 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SLC6A12P48065 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.83□□□□□ -0.03
SLC6A12P48065 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.83□□□□□ -0.03
SLC6A12P48065 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.83□□□□□ -0.03
SLC6A12P48065 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SLC6A12P48065 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
SLC6A12P48065 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC6A12P48065 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC6A12P48065 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC6A12P48065 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC6A12P48065 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.83□□□□□ -0.04
SLC6A12P48065 AL442647.2-201ENST00000429864 857 ntBASIC14.83□□□□□ -0.04
SLC6A12P48065 HLA-K-203ENST00000430151 1046 ntBASIC14.83□□□□□ -0.04
SLC6A12P48065 BCRP1-201ENST00000444246 691 ntBASIC14.83□□□□□ -0.04
SLC6A12P48065 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC6A12P48065 SPCS2P1-201ENST00000561636 679 ntBASIC14.83□□□□□ -0.04
SLC6A12P48065 AC120045.2-201ENST00000567334 178 ntBASIC14.83□□□□□ -0.04
SLC6A12P48065 AC124283.3-201ENST00000570869 594 ntBASIC14.83□□□□□ -0.04
SLC6A12P48065 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.83□□□□□ -0.04
SLC6A12P48065 AL096865.1-201ENST00000606796 927 ntBASIC14.83□□□□□ -0.04
SLC6A12P48065 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC6A12P48065 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC6A12P48065 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC6A12P48065 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC6A12P48065 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 AL391825.1-201ENST00000457671 1364 ntBASIC14.83□□□□□ -0.04
SLC6A12P48065 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC6A12P48065 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SLC6A12P48065 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC6A12P48065 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC6A12P48065 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A12P48065 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC6A12P48065 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SLC6A12P48065 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SLC6A12P48065 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SLC6A12P48065 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
SLC6A12P48065 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC6A12P48065 FAM45BP-202ENST00000592932 1624 ntBASIC14.82□□□□□ -0.04
SLC6A12P48065 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A12P48065 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SLC6A12P48065 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms