Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 U2AF2-208ENST00000592874 849 ntTSL 515.67■□□□□ 0.13e-7■□□□□ 10
RPS3P23396 CD81-210ENST00000493525 396 ntTSL 514.97□□□□□ -0.018e-7■□□□□ 10
RPS3P23396 MZT2A-206ENST00000491265 2826 ntTSL 221.66■■□□□ 1.061e-7■□□□□ 10
RPS3P23396 TRAM1-202ENST00000518678 535 ntTSL 417.47■□□□□ 0.398e-23■□□□□ 10
RPS3P23396 TRAM1-203ENST00000520700 542 ntTSL 517.18■□□□□ 0.348e-23■□□□□ 10
RPS3P23396 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.298e-23■□□□□ 10
RPS3P23396 TRAM1-204ENST00000521049 872 ntTSL 515.55■□□□□ 0.088e-23■□□□□ 10
RPS3P23396 SNORD46-201ENST00000364043 104 ntBASIC7.52□□□□□ -1.218e-48■□□□□ 10
RPS3P23396 AP2M1-219ENST00000484469 558 ntTSL 317.65■□□□□ 0.424e-9■□□□□ 10
RPS3P23396 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.951e-18■□□□□ 10
RPS3P23396 C2orf72-203ENST00000477463 579 ntTSL 411.62□□□□□ -0.551e-18■□□□□ 10
RPS3P23396 RPL19-202ENST00000577741 1303 ntTSL 27.98□□□□□ -1.131e-27■□□□□ 10
RPS3P23396 SLC13A5-204ENST00000570687 419 ntTSL 33.07□□□□□ -1.922e-14■□□□□ 10
RPS3P23396 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.765e-16■□□□□ 9.9
RPS3P23396 LTBP3-210ENST00000528516 3935 ntTSL 1 (best)17.24■□□□□ 0.355e-16■□□□□ 9.9
RPS3P23396 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.781e-9■□□□□ 9.9
RPS3P23396 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.161e-9■□□□□ 9.9
RPS3P23396 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.051e-9■□□□□ 9.9
RPS3P23396 SEPT9-215ENST00000586521 601 ntTSL 417.3■□□□□ 0.369e-33■□□□□ 9.9
RPS3P23396 SEPT9-226ENST00000589920 580 ntTSL 215.12■□□□□ 0.019e-33■□□□□ 9.9
RPS3P23396 SEPT9-210ENST00000585929 906 ntTSL 414.76□□□□□ -0.059e-33■□□□□ 9.9
RPS3P23396 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.24□□□□□ -0.139e-33■□□□□ 9.9
RPS3P23396 SEPT9-212ENST00000586128 752 ntTSL 413.76□□□□□ -0.219e-33■□□□□ 9.9
RPS3P23396 SEPT9-209ENST00000585638 565 ntTSL 412.96□□□□□ -0.339e-33■□□□□ 9.9
RPS3P23396 SEPT9-213ENST00000586433 569 ntTSL 412.01□□□□□ -0.499e-33■□□□□ 9.9
RPS3P23396 SEPT9-238ENST00000591472 555 ntTSL 411.83□□□□□ -0.529e-33■□□□□ 9.9
RPS3P23396 SEPT9-235ENST00000591020 582 ntTSL 410.89□□□□□ -0.679e-33■□□□□ 9.9
RPS3P23396 SEPT9-234ENST00000590938 611 ntTSL 410□□□□□ -0.819e-33■□□□□ 9.9
RPS3P23396 STMN1-205ENST00000446334 665 ntTSL 25.96□□□□□ -1.463e-21■□□□□ 9.9
RPS3P23396 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.216e-6■□□□□ 9.9
RPS3P23396 ESPN-214ENST00000633239 1494 ntTSL 518.3■□□□□ 0.527e-20■□□□□ 9.9
RPS3P23396 AMFR-203ENST00000563285 486 ntTSL 214.28□□□□□ -0.122e-10■□□□□ 9.9
RPS3P23396 GLG1-204ENST00000561481 2487 ntTSL 28.64□□□□□ -1.032e-10■□□□□ 9.9
RPS3P23396 GLG1-208ENST00000563646 639 ntTSL 34.57□□□□□ -1.682e-10■□□□□ 9.9
RPS3P23396 PSME2-212ENST00000560370 620 ntTSL 315.98■□□□□ 0.155e-7■□□□□ 9.9
RPS3P23396 DNAJB11-204ENST00000495390 4079 ntTSL 26.92□□□□□ -1.32e-8■□□□□ 9.9
RPS3P23396 SPTBN1-205ENST00000496323 2225 ntTSL 213.56□□□□□ -0.246e-10■□□□□ 9.9
RPS3P23396 PRKAB1-202ENST00000537057 1510 nt12.2□□□□□ -0.466e-6■□□□□ 9.9
RPS3P23396 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.654e-10■□□□□ 9.9
RPS3P23396 SET-204ENST00000372692 2850 ntTSL 1 (best) BASIC10.33□□□□□ -0.764e-10■□□□□ 9.9
RPS3P23396 SET-205ENST00000409104 962 ntTSL 5 BASIC8.96□□□□□ -0.984e-10■□□□□ 9.9
RPS3P23396 SEC61A1-204ENST00000481210 521 ntTSL 54.84□□□□□ -1.632e-10■□□□□ 9.9
RPS3P23396 FKBP10-203ENST00000455106 1965 ntTSL 214.41□□□□□ -0.13e-9■□□□□ 9.9
RPS3P23396 SERINC3-204ENST00000468234 393 ntTSL 29.63□□□□□ -0.874e-9■□□□□ 9.9
RPS3P23396 CP-202ENST00000455472 571 ntTSL 52.74□□□□□ -1.972e-8■□□□□ 9.9
RPS3P23396 RPL27A-207ENST00000530585 577 ntTSL 29.71□□□□□ -0.863e-32■□□□□ 9.9
RPS3P23396 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.59□□□□□ -1.353e-32■□□□□ 9.9
RPS3P23396 AK2-209ENST00000491241 596 ntTSL 311.18□□□□□ -0.625e-7■□□□□ 9.9
RPS3P23396 BSDC1-202ENST00000373520 1630 ntTSL 216.33■□□□□ 0.22e-8■□□□□ 9.8
RPS3P23396 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.52□□□□□ -0.082e-8■□□□□ 9.8
RPS3P23396 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.21□□□□□ -0.132e-8■□□□□ 9.8
RPS3P23396 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC12.66□□□□□ -0.382e-8■□□□□ 9.8
RPS3P23396 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.5□□□□□ -0.412e-8■□□□□ 9.8
RPS3P23396 BSDC1-206ENST00000455895 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.52e-8■□□□□ 9.8
RPS3P23396 BSDC1-204ENST00000444377 2925 ntTSL 1 (best)10.38□□□□□ -0.752e-8■□□□□ 9.8
RPS3P23396 FUBP1-205ENST00000470287 726 ntTSL 32.8□□□□□ -1.964e-10■□□□□ 9.8
RPS3P23396 LSM7-207ENST00000591745 543 ntTSL 213.81□□□□□ -0.21e-22■□□□□ 9.8
RPS3P23396 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.616e-7■□□□□ 9.8
RPS3P23396 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.285e-8■□□□□ 9.8
RPS3P23396 PSME2-203ENST00000558273 1502 ntTSL 214.79□□□□□ -0.044e-7■□□□□ 9.8
RPS3P23396 PSME2-204ENST00000558931 2754 ntTSL 514.03□□□□□ -0.164e-7■□□□□ 9.8
RPS3P23396 PSME2-202ENST00000471700 706 ntTSL 313.67□□□□□ -0.224e-7■□□□□ 9.8
RPS3P23396 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.344e-7■□□□□ 9.8
RPS3P23396 PSME2-213ENST00000560410 755 ntTSL 3 BASIC11.56□□□□□ -0.564e-7■□□□□ 9.8
RPS3P23396 PSME2-217ENST00000615264 874 ntTSL 5 BASIC11.06□□□□□ -0.644e-7■□□□□ 9.8
RPS3P23396 RALY-207ENST00000481580 773 ntTSL 222.58■■□□□ 1.212e-6■□□□□ 9.8
RPS3P23396 PTOV1-206ENST00000596095 734 ntTSL 311.94□□□□□ -0.55e-11■□□□□ 9.8
RPS3P23396 TRIM28-209ENST00000597423 733 ntTSL 315.12■□□□□ 0.011e-8■□□□□ 9.8
RPS3P23396 TRIM28-210ENST00000597618 609 ntTSL 29.5□□□□□ -0.891e-8■□□□□ 9.8
RPS3P23396 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.19■■□□□ 1.466e-18■□□□□ 9.8
RPS3P23396 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.96□□□□□ -0.176e-18■□□□□ 9.8
RPS3P23396 RPL27A-203ENST00000525981 297 ntTSL 513.96□□□□□ -0.176e-18■□□□□ 9.8
RPS3P23396 RPL27A-212ENST00000534599 651 ntTSL 512.83□□□□□ -0.366e-18■□□□□ 9.8
RPS3P23396 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.496e-18■□□□□ 9.8
RPS3P23396 RPL27A-204ENST00000526562 519 ntTSL 2 BASIC10.57□□□□□ -0.726e-18■□□□□ 9.8
RPS3P23396 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.58□□□□□ -1.366e-18■□□□□ 9.8
RPS3P23396 LTBP3-218ENST00000530866 3756 ntTSL 212.19□□□□□ -0.465e-9■□□□□ 9.8
RPS3P23396 OBSL1-209ENST00000465589 571 ntTSL 318.62■□□□□ 0.575e-7■□□□□ 9.8
RPS3P23396 TBL2-211ENST00000452475 1262 ntTSL 325.01■■□□□ 1.597e-17■□□□□ 9.8
RPS3P23396 TBL2-221ENST00000496056 579 ntTSL 225.01■■□□□ 1.597e-17■□□□□ 9.8
RPS3P23396 TBL2-207ENST00000435792 1109 ntTSL 324.98■■□□□ 1.597e-17■□□□□ 9.8
RPS3P23396 TBL2-212ENST00000458466 673 ntTSL 324.31■■□□□ 1.487e-17■□□□□ 9.8
RPS3P23396 TBL2-204ENST00000426966 1196 ntTSL 323.34■■□□□ 1.337e-17■□□□□ 9.8
RPS3P23396 TBL2-217ENST00000476136 559 ntTSL 421.13■□□□□ 0.977e-17■□□□□ 9.8
RPS3P23396 SLC5A6-213ENST00000461757 2307 ntTSL 217.88■□□□□ 0.452e-11■□□□□ 9.8
RPS3P23396 IER3-202ENST00000376377 1350 ntBASIC17.57■□□□□ 0.47e-9■□□□□ 9.8
RPS3P23396 AHCTF1-205ENST00000478568 611 ntTSL 416.26■□□□□ 0.191e-11■□□□□ 9.8
RPS3P23396 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.137e-9■□□□□ 9.8
RPS3P23396 TBL2-218ENST00000479892 494 ntTSL 46.57□□□□□ -1.367e-17■□□□□ 9.8
RPS3P23396 SEC23A-212ENST00000556092 571 ntTSL 413.54□□□□□ -0.242e-12■□□□□ 9.8
RPS3P23396 SEC23A-208ENST00000555017 588 ntTSL 43.05□□□□□ -1.922e-12■□□□□ 9.8
RPS3P23396 AFP-203ENST00000506820 476 ntTSL 23.15□□□□□ -1.911e-323■□□□□ 9.8
RPS3P23396 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.631e-8■□□□□ 9.8
RPS3P23396 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.572e-6■□□□□ 9.8
RPS3P23396 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.78■■□□□ 1.561e-8■□□□□ 9.8
RPS3P23396 LITAF-213ENST00000574701 553 ntTSL 423.78■■□□□ 1.41e-8■□□□□ 9.8
RPS3P23396 PREB-203ENST00000416802 564 ntTSL 423.68■■□□□ 1.382e-6■□□□□ 9.8
RPS3P23396 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.37■■□□□ 1.332e-6■□□□□ 9.8
RPS3P23396 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.142e-6■□□□□ 9.8
RPS3P23396 HNF1A-206ENST00000538646 1649 ntTSL 1 (best)21.8■■□□□ 1.081e-8■□□□□ 9.8
Retrieved 100 of 24,271 protein–RNA pairs in 409.7 ms