RNA–Protein interactions for RNA: ENST00000481210.5

SEC61A1-204, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 5

Gene SEC61A1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-204ENST00000481210 DNAJC5BQ9UF47 199 aa13.67□□□□□ -0.22
SEC61A1-204ENST00000481210 DNAJC5Q9H3Z4 198 aa13.51□□□□□ -0.25
SEC61A1-204ENST00000481210 ABCC9O60706 1549 aa13.2□□□□□ -0.3
SEC61A1-204ENST00000481210 AEBP2Q6ZN18 517 aaPredicted RBP12.83□□□□□ -0.36
SEC61A1-204ENST00000481210 NISCHQ9Y2I1 1504 aa12.51□□□□□ -0.41
SEC61A1-204ENST00000481210 TRIM41Q8WV44 630 aa12.33□□□□□ -0.44
SEC61A1-204ENST00000481210 CHIC1Q5VXU3 224 aa12.3□□□□□ -0.44
SEC61A1-204ENST00000481210 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
SEC61A1-204ENST00000481210 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.49
SEC61A1-204ENST00000481210 CUX2O14529 1486 aa11.91□□□□□ -0.5
SEC61A1-204ENST00000481210 RB1CC1Q8TDY2 1594 aa11.91□□□□□ -0.5
SEC61A1-204ENST00000481210 CC2D2AQ9P2K1 1620 aa11.87□□□□□ -0.51
SEC61A1-204ENST00000481210 ILDR1Q86SU0 546 aaPredicted RBP11.86□□□□□ -0.51
SEC61A1-204ENST00000481210 CCDC180Q9P1Z9 1646 aa11.82□□□□□ -0.52
SEC61A1-204ENST00000481210 UNC13AQ9UPW8 1703 aa11.75□□□□□ -0.53
SEC61A1-204ENST00000481210 BICRAQ9NZM4 1560 aa11.71□□□□□ -0.54
SEC61A1-204ENST00000481210 EIF4G1Q04637 1599 aaKnown RBP11.49□□□□□ -0.57
SEC61A1-204ENST00000481210 NACADO15069 1562 aa11.47□□□□□ -0.57
SEC61A1-204ENST00000481210 ERCC6Q03468 1493 aa11.44□□□□□ -0.58
SEC61A1-204ENST00000481210 SHROOM4Q9ULL8 1493 aa11.27□□□□□ -0.6
SEC61A1-204ENST00000481210 TRHP20396 242 aaPredicted RBP11.25□□□□□ -0.61
SEC61A1-204ENST00000481210 RIMBP3CA6NJZ7 1639 aa11.22□□□□□ -0.61
SEC61A1-204ENST00000481210 RIMBP3BA6NNM3 1639 aa11.22□□□□□ -0.61
SEC61A1-204ENST00000481210 RIMBP3Q9UFD9 1639 aa11.22□□□□□ -0.61
SEC61A1-204ENST00000481210 THOC2Q8NI27 1593 aaKnown RBP11.16□□□□□ -0.62
SEC61A1-204ENST00000481210 BAZ1AQ9NRL2 1556 aaPredicted RBP11.11□□□□□ -0.63
SEC61A1-204ENST00000481210 LMTK3Q96Q04 1460 aa11.11□□□□□ -0.63
SEC61A1-204ENST00000481210 SOCS7O14512 581 aa11.1□□□□□ -0.63
SEC61A1-204ENST00000481210 OSCARQ8IYS5 282 aa11.07□□□□□ -0.64
SEC61A1-204ENST00000481210 DCAF8L2P0C7V8 631 aa11.05□□□□□ -0.64
SEC61A1-204ENST00000481210 ARHGEF11O15085 1522 aa11.01□□□□□ -0.65
SEC61A1-204ENST00000481210 ILDR2Q71H61 639 aa10.99□□□□□ -0.65
SEC61A1-204ENST00000481210 NESP48681 1621 aa10.98□□□□□ -0.65
SEC61A1-204ENST00000481210 SENP3Q9H4L4 574 aaPredicted RBP10.96□□□□□ -0.65
SEC61A1-204ENST00000481210 CYB5RLQ6IPT4 315 aa10.95□□□□□ -0.66
SEC61A1-204ENST00000481210 FBXO41Q8TF61 875 aa10.91□□□□□ -0.66
SEC61A1-204ENST00000481210 SMARCA2P51531 1590 aa10.9□□□□□ -0.67
SEC61A1-204ENST00000481210 MYO15BQ96JP2 1530 aa10.83□□□□□ -0.68
SEC61A1-204ENST00000481210 ARAP1Q96P48 1450 aa10.82□□□□□ -0.68
SEC61A1-204ENST00000481210 PHF23Q9BUL5 403 aaPredicted RBP10.82□□□□□ -0.68
SEC61A1-204ENST00000481210 ERCC6L2Q5T890 1561 aa10.82□□□□□ -0.68
SEC61A1-204ENST00000481210 KIF21AQ7Z4S6 1674 aa10.8□□□□□ -0.68
SEC61A1-204ENST00000481210 SCRIBQ14160 1630 aa10.77□□□□□ -0.68
SEC61A1-204ENST00000481210 KDM4FA0A1W2PPD8 638 aa10.77□□□□□ -0.69
SEC61A1-204ENST00000481210 DISP3Q9P2K9 1392 aa10.72□□□□□ -0.69
SEC61A1-204ENST00000481210 HECW2Q9P2P5 1572 aa10.7□□□□□ -0.7
SEC61A1-204ENST00000481210 WDR62O43379 1518 aa10.63□□□□□ -0.71
SEC61A1-204ENST00000481210 NCAPD3P42695 1498 aa10.61□□□□□ -0.71
SEC61A1-204ENST00000481210 LAMC3Q9Y6N6 1575 aa10.6□□□□□ -0.71
SEC61A1-204ENST00000481210 MRC2Q9UBG0 1479 aa10.59□□□□□ -0.71
SEC61A1-204ENST00000481210 PDS5BQ9NTI5 1447 aa10.53□□□□□ -0.72
SEC61A1-204ENST00000481210 SYNJ2O15056 1496 aa10.51□□□□□ -0.73
SEC61A1-204ENST00000481210 SPATA31D1Q6ZQQ2 1576 aa10.51□□□□□ -0.73
SEC61A1-204ENST00000481210 RSF1Q96T23 1441 aaPredicted RBP10.46□□□□□ -0.74
SEC61A1-204ENST00000481210 HMGXB3Q12766 1538 aa10.42□□□□□ -0.74
SEC61A1-204ENST00000481210 ATAD2BQ9ULI0 1458 aa10.4□□□□□ -0.74
SEC61A1-204ENST00000481210 CHD1O14646 1710 aa10.37□□□□□ -0.75
SEC61A1-204ENST00000481210 KIF13AQ9H1H9 1805 aa10.37□□□□□ -0.75
SEC61A1-204ENST00000481210 ADGRL1O94910 1474 aa10.36□□□□□ -0.75
SEC61A1-204ENST00000481210 ZNF608Q9ULD9 1512 aaPredicted RBP10.28□□□□□ -0.76
SEC61A1-204ENST00000481210 SMARCA4P51532 1647 aa10.28□□□□□ -0.76
SEC61A1-204ENST00000481210 KDM6BO15054 1643 aa10.26□□□□□ -0.77
SEC61A1-204ENST00000481210 CEP164Q9UPV0 1460 aa10.25□□□□□ -0.77
SEC61A1-204ENST00000481210 CADPSQ9ULU8 1353 aa10.2□□□□□ -0.78
SEC61A1-204ENST00000481210 CLASP1Q7Z460 1538 aa10.19□□□□□ -0.78
SEC61A1-204ENST00000481210 BAZ1BQ9UIG0 1483 aaKnown RBP10.19□□□□□ -0.78
SEC61A1-204ENST00000481210 DCAF1Q9Y4B6 1507 aa10.18□□□□□ -0.78
SEC61A1-204ENST00000481210 FOXD1Q16676 465 aa10.18□□□□□ -0.78
SEC61A1-204ENST00000481210 URB2Q14146 1524 aaKnown RBP10.17□□□□□ -0.78
SEC61A1-204ENST00000481210 EIF4G3O43432 1585 aaKnown RBP10.16□□□□□ -0.78
SEC61A1-204ENST00000481210 GAPVD1Q14C86 1478 aa10.16□□□□□ -0.78
SEC61A1-204ENST00000481210 FANCD2Q9BXW9 1451 aa10.12□□□□□ -0.79
SEC61A1-204ENST00000481210 FBLN2P98095 1184 aa10.12□□□□□ -0.79
SEC61A1-204ENST00000481210 CERKQ8TCT0 537 aa10.12□□□□□ -0.79
SEC61A1-204ENST00000481210 IFT140Q96RY7 1462 aa10.08□□□□□ -0.8
SEC61A1-204ENST00000481210 ZCCHC6Q5VYS8 1495 aaKnown RBP10.05□□□□□ -0.8
SEC61A1-204ENST00000481210 FAM69CQ0P6D2 419 aa10.03□□□□□ -0.8
SEC61A1-204ENST00000481210 ABCC10Q5T3U5 1492 aa10.03□□□□□ -0.8
SEC61A1-204ENST00000481210 DIP2BQ9P265 1576 aa10.01□□□□□ -0.81
SEC61A1-204ENST00000481210 TSPOAP1O95153 1857 aa10□□□□□ -0.81
SEC61A1-204ENST00000481210 SYNJ1O43426 1573 aa10□□□□□ -0.81
SEC61A1-204ENST00000481210 AQRO60306 1485 aaKnown RBP eCLIP9.98□□□□□ -0.812e-6■■■■□ 26.3
SEC61A1-204ENST00000481210 PEG3Q9GZU2 1588 aa9.96□□□□□ -0.82
SEC61A1-204ENST00000481210 TOP2BQ02880 1626 aa9.95□□□□□ -0.82
SEC61A1-204ENST00000481210 PCF11O94913 1555 aaKnown RBP9.9□□□□□ -0.82
SEC61A1-204ENST00000481210 PLPPR3Q6T4P5 718 aa9.89□□□□□ -0.83
SEC61A1-204ENST00000481210 SNAPC4Q5SXM2 1469 aa9.89□□□□□ -0.83
SEC61A1-204ENST00000481210 MAPKBP1O60336 1514 aa9.86□□□□□ -0.83
SEC61A1-204ENST00000481210 MED1Q15648 1581 aaPredicted RBP9.85□□□□□ -0.83
SEC61A1-204ENST00000481210 TARBP1Q13395 1621 aaKnown RBP9.85□□□□□ -0.83
SEC61A1-204ENST00000481210 CFTRP13569 1480 aa9.82□□□□□ -0.84
SEC61A1-204ENST00000481210 COL17A1Q9UMD9 1497 aaPredicted RBP9.82□□□□□ -0.84
SEC61A1-204ENST00000481210 PPRC1Q5VV67 1664 aaKnown RBP9.81□□□□□ -0.84
SEC61A1-204ENST00000481210 CHMP7Q8WUX9 453 aaPredicted RBP9.79□□□□□ -0.84
SEC61A1-204ENST00000481210 TOPBP1Q92547 1522 aa9.78□□□□□ -0.84
SEC61A1-204ENST00000481210 IFFO2Q5TF58 517 aa9.78□□□□□ -0.84
SEC61A1-204ENST00000481210 PTPRMP28827 1452 aa9.78□□□□□ -0.84
SEC61A1-204ENST00000481210 HSPA2P54652 639 aa9.76□□□□□ -0.85
SEC61A1-204ENST00000481210 CEP170Q5SW79 1584 aa9.75□□□□□ -0.85
SEC61A1-204ENST00000481210 MROH2BQ7Z745 1585 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms